Miscanthus floridulus: 136454383
Help
Entry
136454383 CDS
T10264
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136454383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136454383
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136454383
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136454383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-C3HC4_3
ZnF_RZ-type
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
136454383
NCBI-ProteinID:
XP_066310924
LinkDB
All DBs
Position
5:complement(20982623..20983611)
Genome browser
AA seq
296 aa
AA seq
DB search
MNLDAFECPICLSVFQGSIFQCKNGHVVCDACRVHIQGSCPSCREPVGEIRCRALEDAIA
GVVVPCAFCSHGCRQLFKLKEMRDHEAFHCQQAPFACPLPACAYSAASAPLLHDNILDAH
ALDRDRSFSLVGSTWWVSLRRSMPFMVLLDRVERRVFLLLNGGDVRSGRSLSVVCLGPRP
AANKSLELKLEVGVAGEPGALSMSATGSVACMRSWAGQYPTDGFLFVPDAYYSLDRVVVK
VHVDHAHALDRLASFVRRYHDAVKPLDLLLLVLLLVFFAMAVNVRRALDNYKTRMQ
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggacgcgtttgagtgccccatctgcctctcggtgttccaaggatccatcttc
cagtgcaagaacgggcacgtcgtgtgcgatgcctgccgcgttcacatccaagggagctgc
ccgtcctgtcgcgagcccgtcggcgagatccggtgccgggcgctggaggacgccatcgcc
ggcgtggtcgtcccctgcgcgttctgcagccatgggtgcaggcagctgttcaagctcaag
gagatgcgggaccacgaggcgttccactgccagcaagcgccgttcgcgtgcccgttaccg
gcgtgcgcctactccgcggcgtccgcgccgctcctccacgacaacatcctggacgcgcac
gccctcgacagagaccgcagcttcagcctcgtcgggtccacgtggtgggtgtcgctgcgc
cggagcatgccgttcatggtgctcctggaccgggtggaacggcgcgtgttcctgctgctc
aacggcggggacgttcgctcgggtcggtcgctgtcggtggtctgcctcggcccgcgcccc
gcggccaacaagtcgctggagttgaagctggaggtgggcgtcgccggcgaacccggcgcg
ctctcgatgtcggcaacgggctccgtggcctgcatgcgcagctgggcggggcaataccct
actgacgggttcctgttcgtgccggacgcgtactactccttggaccgtgtcgtcgtcaaa
gtccatgtggaccatgcccatgccctagataggcttgctagtttcgtacgacgctaccac
gacgcagtgaaaccattggatctgttgttgttggtgttacttttggttttcttcgcaatg
gctgtcaatgtaagacgagctctggataattacaaaactagaatgcagtga
DBGET
integrated database retrieval system
