Miscanthus floridulus: 136454387
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Entry
136454387 CDS
T10264
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 11
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136454387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136454387
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136454387
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136454387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DUF4729
Motif
Other DBs
NCBI-GeneID:
136454387
NCBI-ProteinID:
XP_066310929
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Position
5:complement(21193486..21248660)
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AA seq
334 aa
AA seq
DB search
MRGSGAVKGEAMKGGDEDPVERRATVETTTTGEASRACLIHLLSLCGQGEGALVAAVVQA
MEEPQINIRMAMSHLHCHACVLPLKPPTFECEAGHVVCRGCRGSHVQACAAAGTYVPCAE
LDGIVRDAKVACAYEAYSCTSWVVYYEAPDHHRSCRFAPCFCPVPGCGHFTSPARLAEHF
FSHHAWPVTEVDYAKPCKLAVPGPEEKLVLMGKADGSVFLVSPCAFGAATAVSLVCVRAC
GDAAAGAPQYTCNLWAEVAGNALLLTSVVASSDLAGGFPATDKVMFLPLPPLLYGESGEP
PALMARIDKVGASTIRSRSPSATPPSSLPRRMLQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaggggttctggggcggtgaagggagaggcgatgaagggaggagatgaggacccggtg
gagaggagagcgacggtggagacgacgacgacgggggaggctagcagggcttgcttgatt
cacctactgtcgctttgtgggcagggagagggagctctggtggcggcggtggtgcaagcc
atggaggagccgcagatcaacatccggatggccatgtcccatctccactgccatgcctgc
gtcctgcccctcaaaccccctaccttcgagtgcgaggccggccacgtcgtgtgccgcggc
tgtcgcggcagccacgtccaggcctgcgccgccgccggcacctacgtcccctgcgccgag
ctggacgggatcgtgcgtgacgccaaggtggcgtgcgcctacgaggcgtacagctgcacg
agctgggtcgtctactacgaggcgccggaccaccaccgctcctgccggttcgcgccctgc
ttctgcccggtccctggctgcgggcacttcacctcgccggcgaggctggccgagcacttc
ttcagccaccacgcctggcccgtcaccgaggtcgactacgcgaagccgtgcaagctcgcc
gtcccgggcccggaggagaagctggtcctgatgggcaaggcggacgggtccgtgttcctg
gtgtccccgtgcgccttcggcgcggccacggccgtgtcgctggtgtgcgtgagggcgtgc
ggcgacgcggccgcgggggcaccccagtacacctgtaacctctgggcggaggtcgcgggc
aacgccctgctgctcacgtccgtggtggcaagcagcgacctggccggcggcttcccggcg
accgacaaggtcatgttcctgccgctgccgccgctgctgtacggcgagtccggcgagccg
cctgctctcatggcccgcatcgacaaagttggcgcgtccactatcaggtcgaggtccccg
tccgccactccgccgtcgagcctgcccaggaggatgctgcagtaa
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