Miscanthus floridulus: 136456181
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Entry
136456181 CDS
T10264
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mflo03009
]
136456181
Ribosome biogenesis [BR:
mflo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
136456181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
CEP104-like_TOG
INTS5_N
Motif
Other DBs
NCBI-GeneID:
136456181
NCBI-ProteinID:
XP_066312061
LinkDB
All DBs
Position
6:78015037..78035477
Genome browser
AA seq
2692 aa
AA seq
DB search
MATPSYAAVKGLNTSSSSRKRFSFKSFSQRVEEIDIDVYRSLHTLKAEPSSGSSFLLDAI
AEWRELNTAEDFISFYEEMIPLVQTLPQIVLHREKLFSALVQRVNMSARLSLEPILMLIA
ALSRDILEDFLPFLGRHASALLALLNDGGDRDPEILEQVFTSWSYIMMYLQKYLVKDTVQ
ILRTTAALRYSPKDYVREFMAESVSFLLRNAPNNQLTQGLLKVLREAAKQPSPTRIDGVV
SLLWHVMKGTSTKLHSKAGQVLKFLLSKSVVSTLPDKFPDGSSTIHEFMTGLIQRLCDEV
DPKELPLMYTCLFEEINCCLKDGCLEHLKCLIDFLAFALQKKQSNVFDKVKLIKLVELLV
SRYVLPGSNITEASSSEVLGSILDFLLSVLDVPTISGNLSIVSPFYAPVFKLTNPSVIVF
IKKLLATGPLVTQHFESQILSAMDNFIASSPEDVIFILHNFFKGSKKQIFLRSTDGNHLD
SVEKTYKFFESKFSFWIELLDDTVGTGNRSSNNQVSEKEAAILWGSICCYPNMKGVHQDS
LSLLRKLIFNFDRLLEVGEENMNGLPMTTWRSLLGAALSSYHELSLVNTSRNSEFSFFIS
LAKSHSTCPQVLSAVAEYLDSLHGLPSLEVTKEFDPQNLLDLFSIFAVNLSSPSKDVRIL
TLRILSYFVKMDQRLITDEERPHKRQRTEVSGEEAVAKYANVVDTLLIIESTPISVSTSR
KIAIFISRIQMSLYSKMVHDDYIPPLLHGIIGILYNRFSDLWPPTLDCLAVLIRQHKELV
WGQFVQFIAIHQSKGLTVKNKEKLEAATQPQSIFDCFNLYLAMDFDCTPAETMATLLLQS
LQRIPDVAESRSRHLIPLFLNFMGYDDGSIFSADSYMPEKCKGKQWKTILKEWLNLLRLM
HNTRSLYQSKFLQEVLTKRVLDESDPDIQAKALDCLLNWKDEFLTPYSQNLKNLIDVKTL
REELTTWAVSHDSSSILKDHRSRVVPLVIRVLAPKVRKLKLLGSRKHTGVSHRKAILRFL
LQFDSNELELFFSLLLRSLIPGSLQLKMFGSQSDNLLGNFTDIVGTSTEICVENFTWKKA
NGFIHLVEEIFGTFDMAHISPFLNVLLIIVARLLESCMRNLRSESDGKYPCNQSNDHDND
CSINSEVGNSVNVDECRKEMHLGDHMETSVSIKQLKDLRSSCIRIVSSALSHYESHEFGE
NFWGIFSSSVKPLIDCFTQEASSSEKPSSLFACFMAMSRSPKLAPLLGSNNLVPAIFSIL
TVKTASGSITTYTLEFIENLLRLDIDLQQQDDHSVKKVLLPHMDVLIHSLHDFVNHRKEL
NRRSGTWLGQRELRLFKLLLNYITDRSAADNFIDLILPFFSKKDLNSDDCLEALCVVRGI
IQNLRCKVSVKVLNALNPLLATVGLELRLCICDIYDGLSLHDPSMLFLAGLIRDLNAVSA
SELGELDYDTRLNTYDKVRPQLFLGLTEEHVGAILSHCVYDMSSEELILRQSASRALQSF
LDFSAAVMNNDVSKYSIDDKSRENNTRSICTMGCIQKILEKTYLHNMGVAMTKDISIQKE
WIILLREMVSNFNHLASLSSFRPLCKEDMEEDFFHNITHLQAGKRSKALSLFRQGIKENN
FSEDITMKVFVPLFFNMFSDIKAGKGEQVRDICLDTLSAVAAKVQWEQYRTILKRCFREL
NLRPDKQKIILRLICSVLDAFHFMKPANDASGNSDAMSEDADSSLTFSLTMVSSDKQQYL
QKVVFPQVQKLLGSDPEKVNVNINLVALKILKLLPVDYFESQLSSIIHRICNLLKNRLES
IRDEARSALAASVKELGIGYLQFVVKILRAILKRGFELHVLGYTLHYLLSKNITSDMYGR
LDYCLEDLLAVIDSDLLGDVAEQKEVEKLASKMKETKKRMSFETLKLIAQSITFRTDLLK
KIISPVSLHLQKQLTPKLKTRLEMMLHNIALGIECNPSTETSNLFIFVYCLIEDTITGSR
SECKENTQSSPDQDSTVGKTFLGLGESGSQNSYILTKFALDLLRNRLKSIKLDKEDEQLV
KMLDPFVDLLRKCMSSKHESVLSVTFRCFALLVKLPLPSLKDNAIIIKNVLMDIVQRAGN
SNGHLVTSCFKLLSDLLRGFRISLSENQLQMLVHTPMFVDLQTNPSPVALSLLKTIVRLK
LVSHEIYDMVVKIGELMVTTLTESIQQQCIQIMLQFFLNYPLSEKRLQQHIDFFLANLSY
EHPSGREAVLEMLHDILTRFPQRIIDDQGQTFFLHLVVALANEQHQNVSSMILRAIQKLL
GRIGDQGKSSIFEYSLSWYTGEKKSLWSASAQVIGLLVGDHTLQTGKHLKSILAVVKKIV
ESSVIASGAIQLGLSDEAVLPLWKEAYHSVAMMERLLLRFPELYFEQNMEDIWIIVCKLL
IHPHSMLRSISSSLVASYFATAEKRKREQKLDAPSWLLVQPSRLFIIAVSLLKQLRTELS
DTTANNLIVQNLAYSVCNLHMLIGQSTSTPQFWSSISSDRGAFLEGFELLGSTKLKNMFL
LCTSTSSDTSGSSLGINEEPTSLLVSSILKKMGRIAMQMQDTQIKIVFNCFSMISSALGS
DESLTYADHLLAPLYKVSEGFAGKVVSDEVTQLAQGVQNKLRDLIGSEKFVEVYKSVRMG
LKQKRDGRKQAQKIVAAVDPERHAKRKQRIAAKHREHKRRKIMAMKIGRWMR
NT seq
8079 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccgtcttacgcggcggtgaagggcctcaacacgtcctcgtccagccgcaag
cgcttctcgttcaagagcttctcgcagcgggtggaggagatcgacatcgatgtgtaccgc
agcctccacacgctgaaggcggaaccgtccagcggatcgtccttcctcctcgacgcaatt
gcggagtggagggagctcaatactgcagaggatttcatctcattttatgaggagatgata
ccattggtacagacactgcctcaaattgtcttgcaccgtgaaaagctcttttccgcactt
gtacaaagggtaaacatgagtgcaagattgtccctggagccaatactcatgttgattgca
gctctctccagggatattctagaagattttttgccctttttaggaagacatgctagtgcc
cttttagctctccttaatgatggaggtgatcgtgaccccgaaatcctggagcaggtcttc
acatcctggtcgtatataatgatgtacttgcaaaagtatctagtgaaagatactgtccaa
attcttaggaccacagcagcgttgagatattccccaaaggactatgttagagaatttatg
gcagaatctgtatcatttttgttgaggaatgcacctaataatcagctaacgcaaggtcta
ctgaaagttctacgtgaggctgctaaacaaccatcacctacacggatagacggggtggtc
tctttgctgtggcatgtcatgaaaggaacttccacaaagctacactcaaaagctgggcag
gtcttgaagttcttgttgagcaagtcagttgtttccactctccctgataaattccctgat
gggtcttctactattcatgagttcatgacagggctgattcaaagattatgcgatgaagtg
gatccaaaagaattaccattgatgtatacttgtttatttgaagaaatcaactgctgtctt
aaggatggctgtttggagcatttgaagtgcttgattgattttcttgcatttgctttacag
aagaagcaaagcaatgtattcgataaggtgaagttgattaaacttgttgagttgctggtt
agtagatatgtgttgcctggaagcaacataacagaagcttcttcatctgaggttcttgga
agtattcttgactttctgctttctgttctggatgttccaaccatttctggcaatttgtcc
atcgtatcacctttctatgctccagtgttcaaattaacaaatccgagtgtgattgtcttt
ataaagaaacttttggcaacaggtcctctagttacacaacattttgaaagtcagatattg
agtgcaatggataatttcattgcaagttcacccgaggatgttatctttatccttcacaat
ttctttaaaggatcaaagaagcaaatatttcttcgtagcactgatggaaatcatctggat
tcagtggagaaaacttacaagttctttgaatcaaaattttctttctggatagagttatta
gatgatacagtcggcactggaaatcgatctagtaataatcaggtcagtgaaaaggaagct
gctatactgtggggatctatttgctgctatcctaacatgaaaggtgtacatcaagatagt
ttgtcactgctgaggaagttaatcttcaactttgatcggttgcttgaagtgggagaagag
aacatgaatggtcttccaatgactacctggagaagtctacttggtgcagcattgtcatcg
taccacgaattatcgctggtcaacaccagcagaaattcagaatttagttttttcatatcg
cttgccaagagtcacagtacatgcccacaagtactgtctgctgtagctgaatatttggat
tccctgcatggactaccatccctggaagtgacaaaagaatttgatccacaaaatctcttg
gatctgttctccatctttgctgtcaatttgagcagtccaagcaaggatgttcgaatttta
acgttgaggattctatcatattttgtgaagatggatcaacgtctaatcacagatgaggag
cgaccacacaagaggcagagaacagaagtttctggagaggaagctgttgctaaatatgct
aatgttgtggatactcttttgattattgagtcgacaccaatttcagtatctactagccgt
aaaattgctatcttcatttctcggatacaaatgagtttatattccaagatggttcatgat
gattacatacctcctctcttacatggtattattggcatattgtacaatagatttagtgat
ctgtggccaccaacactggattgccttgctgtcctcattagacaacacaaggagcttgtt
tggggtcagtttgttcagtttattgcaattcaccaatcaaaaggactgactgtgaaaaat
aaggagaagctggaagctgcaacccagccacagtctatttttgactgcttcaacttgtat
cttgctatggactttgattgcacaccagctgagaccatggctaccttattgcttcaatcg
ctccaaaggattcctgatgttgctgaatcccgatctcgacatcttataccgctatttctc
aactttatgggttatgatgatggcagcatctttagtgctgattcatatatgcctgaaaaa
tgtaaaggcaaacaatggaaaacgattctaaaagaatggttaaacttattgaggttaatg
cacaatacaagatcgttatatcagagcaaatttctccaggaagtgctaactaaaagggtt
cttgatgaaagtgatcctgacatacaagcaaaagcattggattgccttttgaactggaag
gatgagttcttgaccccgtacagtcaaaatcttaaaaatctgattgacgtaaagactctt
cgtgaagagctgaccacatgggcagtttcacatgactcctcgtcaattctgaaagaccat
agaagtcgtgtggttcctctggttatccgtgtgttggcaccgaaagtaaggaagctgaag
ctacttggttctcgaaagcacacaggtgtcagtcatcgaaaggcaattcttcgtttcctt
ttgcagtttgattcaaatgaacttgagctctttttctcattacttctgaggtccttgatc
cctggcagcctccagcttaaaatgtttggttctcagtctgacaacctacttggaaatttc
actgacattgttggaacttcaacagaaatttgtgtagagaactttacatggaaaaaggca
aatggtttcattcatctggttgaagaaatttttggtacttttgatatggcacatataagc
ccatttcttaatgttttattaatcattgtcgctcgcttgctggagagttgcatgcggaat
cttagaagtgagagtgatgggaaatatccttgcaaccaatcaaatgaccatgataatgat
tgttccataaattctgaagtgggcaattctgtaaacgtggatgaatgccgtaaagaaatg
catctaggagaccatatggagacaagtgtatccatcaagcagttgaaggatttgaggtct
tcatgtattagaattgtctcgtcagcccttagtcactatgaaagccatgagtttggagaa
aacttctggggtattttttcctcttctgtgaaacctctgatagactgctttacacaagag
gcttccagtagtgagaaaccaagttcattatttgcttgttttatggctatgagtcggagc
ccaaaattagcaccactgctcgggtcgaataatcttgtaccagctattttttctatttta
actgtgaagacagcgtcaggatccatcaccacctatacccttgagttcattgagaatctg
ttgaggttggatattgatttgcagcagcaagatgaccattcagtgaagaaagttcttctt
ccacatatggatgttcttatccatagtctccatgattttgttaatcaccgcaaagagctt
aacaggagatctggtacatggcttgggcaacgcgaacttaggctgttcaaattattgcta
aattacatcacagatcgctcagctgctgataatttcatagaccttattcttccatttttc
agtaagaaagacttgaactccgatgattgtttggaagcactatgtgttgtgaggggaata
attcaaaatctgagatgcaaggtatctgtaaaagttctaaatgcactgaacccattactt
gcgactgtcggattggaactgcggctatgtatctgtgatatttatgatgggttgtcatta
catgatccttcaatgttgtttctggctgggttaatacgagatctgaatgcagtttcagct
tcagaacttggtgaactagattatgacacaagacttaacacctatgacaaggttaggcca
cagttgtttcttggcttgacagaagagcatgtgggcgccatattatctcattgtgtgtat
gatatgtcatctgaagagttgattttgcggcaaagtgcatcgagggctctgcagtcattc
ctggatttttctgctgcagttatgaataatgatgtgtccaaatactctattgatgataaa
tctagagagaataataccagaagcatctgcacgatgggctgtattcagaagatattggaa
aaaacttatctgcacaatatgggagtagcaatgactaaagatatatcaattcaaaaggaa
tggattattttacttagggagatggtctccaattttaatcatttagcatccttaagctca
tttaggcctctctgtaaggaggatatggaagaggattttttccacaacataactcattta
caggctggtaaaagatcaaaggcattgtcgcttttcagacagggaatcaaggaaaacaac
ttttcagaggatatcactatgaaagtctttgttccactatttttcaatatgttttctgac
ataaaagctgggaagggtgaacaagtcagagatatatgtttggatacactatctgctgtt
gctgccaaagtgcagtgggaacagtatagaacaatattgaagagatgcttccgagaatta
aaccttagacctgataagcagaagatcatattgaggctgatttgctccgtgttagatgca
ttccatttcatgaagcctgcaaatgatgcctcaggaaattctgatgctatgagtgaagat
gctgattcttcccttacattctctttgactatggtctcttctgataagcaacagtacctg
caaaaggttgtgtttccgcaggttcaaaagttgttaggatcagatccagagaaagtcaac
gtcaacataaacctagtagcactgaaaatacttaagttgttaccggtggattattttgag
tcacaactttcgagcatcattcatcgaatctgtaacttactcaagaatcgtcttgaaagc
atacgtgatgaagctaggtctgctttagctgcttctgtgaaggaacttgggattgggtat
ttgcagtttgtggtcaagatattaagagctatacttaaaagaggttttgagttacatgtt
ctgggctacacacttcattatttattgtcaaaaaacattacttcggatatgtatggtagg
cttgactactgtttagaagatctgttggcagtgattgacagtgatttacttggagatgtt
gcagaacaaaaggaagttgaaaaacttgcctccaaaatgaaagagacaaagaagagaatg
tcatttgagactcttaagctgattgctcaaagtattacattcaggacagatttactgaag
aagataatctcacctgtttctttacatcttcagaagcaacttactccaaagttgaaaacc
agacttgagatgatgctacacaatatagccttagggattgagtgcaacccatctactgaa
acatcaaacttgtttatcttcgtgtattgtcttattgaggatactattacaggaagtaga
tctgaatgcaaagagaatacacaatctagtcctgatcaagacagtactgtaggaaagacc
ttcctgggactaggtgagagtggatcgcagaattcttatatacttaccaagtttgcactt
gacttacttcgtaatcgtctgaagagcatcaagctagacaaggaagatgaacaactcgtg
aagatgttggatccttttgttgaccttttgcgaaagtgtatgagttccaaacatgaaagt
gttctctcagtcacttttagatgttttgctttattggtgaaacttcctttgccatctctc
aaggacaatgcaattattataaaaaatgtacttatggacattgtacagagagctggaaac
tccaatggtcatttggtcacatcttgttttaagctactttctgatctacttagaggattc
aggatttcactttcagagaatcagcttcagatgcttgttcatacccctatgtttgtggat
cttcagacaaatccttcccctgttgccttatcgcttctcaaaacaatagtcaggctaaaa
ttggtttcccacgaaatttatgatatggttgttaagataggagagttgatggtaacaacg
ctaactgaatctatacagcagcaatgcattcaaattatgctacagttttttctgaactat
ccactttctgagaagcgcttacagcaacatattgacttttttctggcaaacttaagttat
gaacatccttcaggaagagaagcagtgcttgaaatgctccatgacattcttaccagattt
ccccagaggattattgatgaccagggtcaaactttttttcttcatcttgtagttgctcta
gcgaatgaacagcatcagaatgtgtcttcaatgatccttagagctatccaaaagctgtta
ggacgcattggtgatcagggaaagagttccatttttgagtattccctttcgtggtacact
ggtgaaaagaaaagtctgtggagtgcttcagcccaggttattggtttacttgttggtgat
cacacattacaaacgggcaagcaccttaaaagtattctggctgttgttaagaaaatagtg
gaatcatctgtcattgcttctggagctatacaattaggcttatctgatgaagctgtcctg
ccattgtggaaagaggcttaccactctgttgccatgatggagaggttacttcttcgcttt
ccggagttgtattttgagcagaacatggaggatatatggataatagtatgcaagttgttg
atccatcctcattcgatgttgcgtagtatttcaagctctctggtagcatcatattttgct
acagcggagaagaggaaacgtgaacagaaattggatgccccatcatggctgcttgttcaa
ccaagcaggctattcataatagctgtttccttgttgaaacaattgaggactgaactgagt
gatactacggcaaacaatctgattgtacagaatcttgcatactcggtctgcaacttgcat
atgttgattgggcaatcgacctcaacacctcagttttggtctagcattagttctgatcgt
ggtgctttccttgagggttttgaattgcttggttcaacaaaattgaaaaatatgtttctc
ctttgtacttcgacatctagtgatacatctggatctagtcttggcattaacgaagagcct
acatctttgttagtttcgtccatcctaaagaagatgggaagaattgcaatgcagatgcag
gatacacagataaagatcgtgttcaattgcttcagtatgatttcatcagctcttggctct
gatgaatcactaacctatgctgatcacctcttggccccattgtataaagtttctgaagga
tttgctgggaaagttgttagtgatgaagtgacgcaactggcccagggggtccagaacaag
ttacgtgacctgattggctctgagaaatttgttgaagtctacaagagcgttcggatgggc
ctgaaacagaagcgggacggtagaaagcaggcacagaagattgttgcagccgtggaccca
gaacggcatgccaagcgaaagcagcgtattgcagccaagcaccgggaacacaagaggcgg
aagataatggcgatgaagattggcaggtggatgaggtag
DBGET
integrated database retrieval system
