Miscanthus floridulus: 136456203
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Entry
136456203 CDS
T10264
Name
(RefSeq) uncharacterized protein isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
mflo Miscanthus floridulus
Pathway
mflo04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
136456203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136456203
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
136456203
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
SeqA_N
Melibiase_2
TPR_14
Motif
Other DBs
NCBI-GeneID:
136456203
NCBI-ProteinID:
XP_066312085
LinkDB
All DBs
Position
6:79829826..79860767
Genome browser
AA seq
2433 aa
AA seq
DB search
MAASEREAALLTRVAANHLFLAQFEPLRAVLLSLRHRADPGLSADFLRAVVAAGGRVPGV
LWSAPPVCPSPSHLAWLAALELAALPSTPNPEALRLKAEFLVLLQPIADDPAIGAEASEI
LRRLLDLGVTRLKREVEGGGEAGAGAEEANVSEKDLRGLWGVFLDNALVFDALCIGVSRQ
IALDGGFGVDVLLWLRWNVQLAHLDAVKTLVVEGDLDAAAGHLRFLCLDHGLEEDEYRVV
IAELLRKGWAKASNYGGTWSELQDRITKLYGAALQSTSPQLVQLVQLILDNILSEEIEDH
DVSDANGMPLPFKKFLETLLLERDTDSDDKILLDAAITSCKKDLYHYCRLSGKHMLEVVL
ETALSSIKREQLLEAVDVVSLFPLLHPLVAVLGWDILKGKTALRRKLMQLFWTSKSQGLR
LQEYSHYRSPTDETSCEEYLCDLLCFHLDLARFVSSVNSGRLWNLRNSLLFTQQEQGSEV
NNAEILDPFVENLILERLAVQSPMRVLFDVVPGIKFQDAIELVGMQPLPSTTAAWKRMHD
IELMHMRYSLQSVVLALGEMEKCTGDGNDCYYHKALSYLREMQNFMEAIKSSPRKIFMVS
IILSLIHMDDCAKLSQSVPSECYVTHECHDINIESEGKNMVVYFVGLLLDILRHNLQLKG
SDQDHLSSTGLSPAGRQALEWRLKHAKHSIEDLDWRLSVLKRLPPLSERQWSWKEALVLL
CAAPSKLLNLCMQRENYDIGEEAVQRFSLPAEDKASLELAEWVAGAYKRALVEDAVNRAT
DNTNAAHELDILSLRTQLGSLTTILLCVDVAATSAKSGDMCRFLLDEATSLLSEIFPGSS
PKVGPTYWDQIQELATISVIKRVLQRLHDILDLEALPSLQVFFTEMSISSSTESSRVGQK
QRPLGLLHQMIDDAFKGKRQFLSGKLHNVARAIVDEDFDSVYSKEGVNLDKKDVLSSEKG
VLLGHGLRILKQASRTDLASSNVVESSPEHKGSANRYLGPVSTKPSTYLSNFIIYIATIG
DIVDGTDTTHDFNYFSLVYEWPKDLLTRLVFERGSTDAAAKVADTMGVDFVHEIISACVP
PVLPPRTGQGWACIPVIPTICNISSETRLCAIPKSLPAAQGWTAHDSSSSSRQEPLYPLQ
LNLVKHLAQLSSVRAVLACVFGSSILSGDNESSPTNVKDSTQAPETERSFFEFALEQSER
YPTLNRWIQMQSNLHRVSESSVTDKCEVSLHQSKGKFCMKRTREPDSDGESELEEAVISG
NTTSSSLESTKHEDTRLEPTTFISFDWENETPYEKAVERLVSEGKLSDALAVSDRCLRNG
ASDNLLQLLIEQKEEKGQGTGQIHAYGSHNLENDTWQYCLRLRDKKVAAQLALKYLRSWD
LDAAANVLTMCMCHLPENDPMGSEVLHMKQSLQRYGHIMSADDHYTRWQEVEADCEDDPE
GLALRLAAKGAVSAALEVAESASLSIDLRRELQGRQLVKLLTTDPLNGGGPAAASRFLST
LRDSNDALPVAIGAMKLLPDLRSKQLLVHFFLKRTVGNLSDAEIARLNLWALGLRVLSLL
PLPSQQRCSSLHEHPQLIVEVLLMMKQLQSASLILKEFPSLRDDRLIIAYAKKAISINVS
SAPRERRLNISASRAKQKKATTPAKTNFVQSFGNFQREARKAFSWVPRDSGTKTPPKDIL
RKRKSSGSGGDRSSWEAMPGLQEERTPVYPSEGQERIPFVSAPDEWVLTGDPDKDDATRS
SHRYETSPDITLFKALISLCTNESVAAKGALELCMTQMKVVLSSQQLPLDASMDNVARAY
HATETYVQALSYAKSLLKKLVGSSDLSSGSERSKEVDDVSVDTGSSSTGSQYLDELSDLL
AQADMWLGRAELLQSLLGSGIIASLDDIADKESSSRLRDRLVSGERYSMAVYTCKKCKID
ALPVWVAWGHALVRMEHYAQARVKFKQALQQYKGDATSIVTEIINTIEGGPPVDVSSVRS
MYEHLAKSAATIFDDSLSADAYLNVLYMPSTFPRSERSRQSRDPIDNQFTSASSYLEDGP
RSNLDSVRYAECIHYLQDYARPQMLAFMFRHGHYTEACSLFFPFSQPTTEGETSLSSIPS
DPLTTDYGTVDDLCDLCLGYGAMAVLENTIRTITQSPTYHEAHMIQYMNTVLTRICNYCE
THRHFNYLYNFLVLKDDHVASGLCCIQLFMNSMSQEEALRHLGHAKTHFEEALSVRDRTI
EATKLVLRSARNKSAPGKMTRETIMKYSTRVSYQMDVVKALNSIDGPQWKTSLFGNPTDP
ETLRRRCMVVETLAEKHFDLAFRMLHEFDLPAVDIYAGVAASLAERKKGGQLTEFLKNIR
GTIDDDEWDQVLGAAINVYANKHKERPDRLIDMLISNHRKVLACVVCGRLKSAFQIASRS
GSVADVQYVAHQALHANALSVLDMCKQWLAQYM
NT seq
7302 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcggagcgggaggccgcgctcctcacgcgcgtggcagcgaaccacctattc
ctcgcgcagttcgagcccctgcgcgcggtgctcctcagccttcgccaccgcgccgacccg
gggctctctgcggacttcctccgcgcggtcgtcgccgcgggcggccgcgtcccgggcgtg
ctctggtccgctccccctgtctgtccgtccccgtcccacctcgcctggcttgccgcgctc
gagctcgccgccctcccctccactcccaatccagaggcgcttcgcctcaaggcagagttc
ctcgtcctcctccagcccatcgctgacgaccccgccattggcgccgaggccagcgaaatc
ctcaggaggctgctggatttgggggtgacgaggttgaagcgcgaggtcgaaggtggaggg
gaggcaggtgctggtgccgaggaggccaacgtctccgagaaggatctgagagggctgtgg
ggagtgttcctcgacaacgcccttgtgtttgacgcattgtgcataggcgtctcgaggcag
atcgccttggacgggggtttcggcgtggatgtgctcctatggctgcggtggaacgtgcag
cttgcccatctggatgccgtgaagactcttgtcgtggaaggtgatctggatgctgctgct
ggccatcttcggtttctttgccttgatcatggactggaggaggatgagtacagggttgtc
atagcagagcttctcagaaaaggatgggcaaaagcatccaattatggtggaacatggtct
gagttgcaggatagaataactaaattgtatggagctgctcttcaatctactagtccccag
ctcgtgcaactcgttcagctcattctggataacattctttctgaagaaattgaagatcat
gatgtctctgatgctaatgggatgcctcttcctttcaaaaaatttcttgaaacattgttg
ttggagagggatactgactcagatgacaagatcttgttggacgcagctataacatcctgc
aagaaagatctgtaccattattgccgattgtctggaaagcatatgcttgaagtagtcttg
gaaactgctctatcatcaattaagagggagcagcttctagaggctgttgatgttgtttcg
ttgttcccccttctccacccacttgttgctgtcttgggatgggatattttgaagggtaaa
acagctctgcggagaaagctaatgcagctgttctggacaagcaaatcccaaggtctacga
ctacaggaatattcacattaccgtagcccgacagatgagacatcctgtgaggagtacttg
tgtgatcttctatgcttccatctggaccttgcacgttttgtttcaagtgttaattctggc
cgcctgtggaatttgaggaattcattgttgtttacccaacaagagcaaggttcagaagtt
aacaatgcagaaatattagacccttttgtcgagaacttgatacttgagcggttagctgtt
cagagtcccatgagagtgctatttgacgtagtcccaggaataaaatttcaagatgcgatt
gagcttgttggtatgcagccacttccttcaacgactgccgcttggaagaggatgcatgat
attgaactgatgcacatgcgatattctcttcagtcagttgtgcttgctctaggagagatg
gaaaagtgtacaggtgatgggaatgattgttattatcataaagcattgtcatatctcagg
gagatgcaaaattttatggaggctatcaaaagttctccaagaaagattttcatggttagc
attatattatccttgatacacatggatgactgtgccaaattgtctcaatcagttccttct
gagtgctatgttactcatgaatgccatgatattaatatcgaatctgagggaaagaacatg
gtggtatattttgttgggcttttacttgatatacttcgtcataatctccaattaaaaggc
tctgatcaggatcacctttcaagtactggtctgtcacctgctggtagacaagcattagaa
tggaggctcaaacatgccaaacattccattgaagacttggattggcgtctatctgttcta
aaacgtcttccacctctgtctgagcggcaatggagttggaaggaagcattagttcttcta
tgtgctgctccttcgaagttactgaatctatgcatgcaaagggaaaactatgatatagga
gaagaagctgtacaacgattttctttacctgccgaggataaagcttcccttgaactagct
gaatgggtagctggcgcatataaaagagcattggttgaagatgctgtgaatcgtgccaca
gataatacgaatgcggcacatgaattggatattttgtcattacgcacacagcttggttct
ttaactacaattctgctttgtgttgatgttgctgcaacttctgctaagtcaggtgatatg
tgccgatttcttcttgatgaggcaacaagcttgttatctgaaatatttccaggaagctcc
ccaaaagtaggaccaacttactgggatcagatccaagaacttgctaccatatcagtgata
aagcgcgtccttcagcgtctgcatgacatcttggatctggaagctcttccatctcttcaa
gtgttttttaccgagatgagcatctcttcgtcaacggaatctagcagagttggacaaaag
caacgtcctcttgggcttctgcaccaaatgattgatgacgccttcaaaggaaagcgacag
tttttgagtggtaaacttcacaatgttgctagagctattgttgacgaggactttgatagt
gtttattcgaaggaaggtgtcaacttagacaagaaggatgttctgagttctgaaaaaggt
gtactccttggtcatgggcttagaattctaaaacaggcatctaggactgaccttgcatct
tcaaatgttgtggaaagcagtccagaacacaaaggttctgcaaacagatatctgggccct
gtatctaccaagccgtcaacatatttatcaaacttcataatatatattgcaaccatcggt
gacatagttgatggaactgacacaactcatgatttcaactacttctcattagtctatgaa
tggccgaaagatctattaactcgtctagtttttgagcgtggaagcactgatgcagcggca
aaggtcgctgacacaatgggtgttgattttgtgcatgagattatatcagcatgtgtgcca
cctgttttacctccacgaacaggacaaggatgggcttgcattcctgttatacctaccatt
tgtaatattagttcagaaaccagactatgcgccattccaaagtctcttcctgctgctcaa
ggatggactgcacatgattcgtcctcgtcttctcgtcaagaacccctctatcctctccaa
ttgaatttagtgaagcatttggcccagttatcttcagtaagagcagttttggcatgtgta
tttggaagtagcatactatctggggacaatgaatcatctcctactaatgtgaaagattca
acacaagctcctgaaactgagagatcattttttgaatttgctcttgagcaatcagagaga
tatccaaccttgaaccggtggatacagatgcagtctaatcttcatcgagtatccgagtct
tctgtaacagataaatgcgaagtctctttgcatcaatccaaaggaaagttttgtatgaag
cgaacccgtgagcctgacagtgatggtgaatcagagcttgaagaggctgtcataagcggg
aacaccacttcaagttcactagaatccactaaacatgaagacactaggctagagccaaca
acttttatttcatttgattgggagaatgaaacaccatatgaaaaagctgttgagaggcta
gttagtgaaggaaaactatctgatgctcttgccgtgtctgatcgttgtttgcgcaatgga
gcatctgataatttgcttcagttgctcatcgaacagaaggaagaaaaaggtcaaggcaca
ggacaaattcatgcatatggatctcacaatcttgagaacgatacttggcagtactgcttg
aggctgagagacaaaaaagttgcagctcagcttgctctaaagtacctgcgcagctgggac
cttgatgctgcggccaatgtcctaactatgtgcatgtgccacttacctgagaatgatcct
atgggcagtgaggtgttgcacatgaagcaatctttacagcggtatggtcatattatgagt
gctgatgaccactacaccagatggcaagaggttgaagctgattgtgaagatgacccagag
ggcttggcactccgtcttgctgccaaaggagctgtttccgctgctttggaggttgctgaa
agtgcctctttatcaattgatttgcggagggagttgcaaggccgccagcttgtcaaactg
ctaaccactgatccacttaatggtggaggcccagctgcagcttcaagatttctgtcaacc
ttaagagattccaatgatgctcttcctgtagccattggtgctatgaagctattacctgac
ctgcgttcaaagcagcttcttgtgcatttcttcctcaagcgtacagttgggaatctatca
gatgctgagattgcacggcttaatttgtgggcattaggtctccgtgttctttccttattg
ccattgccatcgcaacagcgttgttcttctctgcacgaacaccctcagttgattgtagaa
gtacttttgatgatgaaacaactccagtctgcttctttgattttgaaagaatttccttcc
ttgagggatgataggttaattattgcatatgctaaaaaagcaatctccattaatgttagc
tcagctcctagggaacgtcgactgaatatctctgcatcaagggcaaaacaaaaaaaggcc
acaactccagctaaaacaaattttgtgcaaagtttcggtaactttcagagagaagcacgc
aaagcgttctcatgggtcccccgtgatagtggcactaaaacacccccaaaagatattctt
cggaaaagaaagagttcaggctctggtggtgatagatcctcttgggaagcaatgcctggt
ttacaggaggagcggacacctgtatatccttctgaggggcaagaaagaattccttttgtc
tctgcccctgatgagtgggtgctgacgggagaccctgacaaggatgacgcaactcgttca
tcccatagatatgaaacctctccagatatcacactgttcaaggcattgatatcattgtgc
accaatgagtcagtagctgcaaaaggtgcacttgaattgtgtatgactcagatgaaggtt
gtgctaagctcccaacagttgccccttgatgcctctatggacaacgtagcacgggcttat
catgcaacggaaacttatgtacaggcactctcttatgcaaagagtctacttaaaaagctc
gttggtagtagtgatttgtcaagtggctctgaaagaagtaaggaagttgatgatgtttct
gtggacactggcagttcaagcactgggagccagtatctggatgagctgtctgatctcctg
gctcaagcagacatgtggttagggcgtgcagagcttcttcaaagcctgctgggatcaggt
attattgcctcgctggatgatatagctgacaaagaatcttcaagtagactacgtgacaga
ttagtcagcggtgaacggtacagcatggctgtatatacttgtaaaaagtgcaagattgat
gctttaccagtatgggttgcatggggccatgcattagttcgaatggagcactatgctcaa
gcccgtgtgaagttcaagcaagcacttcaacaatacaaaggcgatgcaacttctattgtt
actgaaataatcaacacaattgaaggagggcctccagttgatgtttcttctgtacgttcc
atgtatgagcatttggcaaagagtgcggcaaccatatttgatgattccctttctgctgat
gcttatcttaatgttctgtacatgccatcgacatttccacgatctgagaggtcccgacag
tccagagatcctatagacaaccaattcacgtctgctagttcctaccttgaagatggccct
cgcagcaatcttgatagtgttcgatatgctgagtgtattcattacttgcaagattatgcg
cggccacaaatgcttgctttcatgttcaggcatggccattacactgaagcatgctctctg
ttcttcccattcagtcaaccaaccacagaaggggaaacatctttgtcttcaattccgagc
gatcctttaacaactgattatgggacagttgatgacttgtgtgatctctgtcttggatat
ggagctatggctgttttggagaatacaatacggacaataacacaatcgcccacatatcat
gaggcacacatgattcagtacatgaacacagttctcactcgcatttgcaactattgtgaa
acacataggcattttaattatctctacaacttcctggttctaaaagatgaccatgttgct
tctggactttgttgtattcaattatttatgaattcaatgtctcaagaggaggctttgagg
catttgggacatgccaagacacatttcgaagaagccttatctgtacgagatagaacaatc
gaggctacaaagttggtattgcggtctgctcggaataagagcgcacctggaaaaatgacc
agggaaacaataatgaaatattccactcgtgtttcctatcagatggatgtggtgaaggcc
ctcaatagtatagatggtcctcagtggaaaacttccctttttgggaatccaactgaccct
gaaactctgaggcgaaggtgcatggttgttgaaactctggctgaaaagcattttgattta
gctttcagaatgcttcatgagtttgatctcccagctgttgatatttatgctggtgtagct
gcatccctcgcagaaaggaaaaaggggggccagttgacagagttcttgaagaatataagg
gggactatagatgatgatgaatgggatcaggttcttggtgctgctataaatgtttatgcc
aacaagcataaagagagaccagatcgcctcatcgacatgctaatcagcaatcacaggaaa
gtacttgcttgtgttgtctgtggacgtctaaaaagtgcgtttcaaatagcctcacgaagt
ggaagtgtcgctgatgttcaatatgttgctcatcaggcattacatgcaaatgcattgtcg
gtacttgacatgtgcaagcaatggctcgctcagtacatgtga
DBGET
integrated database retrieval system
