KEGG   Miscanthus floridulus: 136456537
Entry
136456537         CDS       T10264                                 
Name
(RefSeq) cyclin-H1-1 isoform X1
  KO
K06634  cyclin H
Organism
mflo  Miscanthus floridulus
Pathway
mflo03022  Basal transcription factors
mflo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    136456537
  09124 Replication and repair
   03420 Nucleotide excision repair
    136456537
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mflo03021]
    136456537
   03400 DNA repair and recombination proteins [BR:mflo03400]
    136456537
Transcription machinery [BR:mflo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     136456537
DNA repair and recombination proteins [BR:mflo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     136456537
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B
Other DBs
NCBI-GeneID: 136456537
NCBI-ProteinID: XP_066312572
LinkDB
Position
1:23634130..23639732
AA seq 331 aa
MADFRTSTQRESWIFQSHDLMERWAAANQRAAQTFAQYGTTRLSVDLLDGSVSYPEPAPD
HVEGSSSVKPLSYEEEQLTRVFYEQKIQEVCAAFKFPHKIQATAIIYFKRFYLQWSVMEH
HPKHIMLTCVYASCKVEENHVSAEELGKGIQQDHQIILNNEMILLKTLDFDLIVYAPYRS
IEGFIDDLEDFCRAGNGPFQRLKELRHAAISHVDKMMLTDAPLLYTPGQLALAALHKSND
LLRVVNFERYLETIFSRQHSDCPVEQFVQSINAINYLVDQLNIPNVKDMRHVDRKLKHCW
DPSSHDEHNKKKEKKSKHKSKRTSADAQLNS
NT seq 996 nt   +upstreamnt  +downstreamnt
atggctgatttccggacctccacccaacgggagagctggatcttccagtcgcacgatctg
atggagaggtgggcggcggcaaaccagcgggctgctcagacctttgcgcagtatgggacg
acgcggcttagtgtggacctgcttgatggctcggtctcctacccagagcccgcaccggat
catgttgagggtagctcgagtgtaaagcctctgtcttacgaagaggagcaattgacacgg
gtgttttacgagcagaagattcaggaagtatgcgctgcattcaagttccctcacaaaatc
caggctacagcaataatatatttcaagagattctatttacaatggtctgtaatggagcat
cacccaaagcatattatgttaacatgtgtatatgcttcttgcaaagtggaagaaaaccat
gtttctgctgaggaacttggtaaaggaattcagcaggaccaccagatcattctaaataat
gagatgattcttcttaaaactttagattttgatctcattgtttatgctccatatcgatcg
attgaaggatttattgatgacctagaggatttctgcagggcaggtaatggtccattccag
cgtttgaaggagttgcgccatgctgctatatcccatgttgacaaaatgatgttgactgat
gcacctcttctctatactcctgggcagttggcactggctgctcttcacaagtccaatgat
cttctcagggtcgtcaattttgaaagatacttggaaactatcttctcaaggcaacattct
gattgtccggtcgaacagtttgttcagtcgatcaacgcaatcaattacttggttgaccag
cttaatatccctaatgttaaggacatgagacatgttgaccgcaagctgaaacattgttgg
gatccaagctcacatgatgagcataataagaagaaagaaaagaagtcaaagcacaaatca
aaaagaacatcagctgatgcccaactcaacagctag

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