Miscanthus floridulus: 136456615
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Entry
136456615 CDS
T10264
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136456615
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
136456615
Translation factors [BR:
mflo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
136456615
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136456615
NCBI-ProteinID:
XP_066312625
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Position
6:112662960..112674762
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AA seq
1266 aa
AA seq
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MVHPSGVPVRPSSLRYPAVSPRSRFSFGAPQQRSVNRATAAEARHRRSIQTALAASKGPS
QPPSSPLDDDNGHEDDRMGRKGRKGKGAAAGAAAGGSGGMREATLVRVSKVLEDFRASNA
EVYTFEPDISKQERAAIHEMCRKTGMISKSSGNGTKRRLSVYKRKQKRGPEMEEGPSYLG
FSEEARHVLQDLFMHYPPGDADLNGDFDRNSSDKAANIKWKTDSAFCRPAMSKLDITKKV
EMLASKVNGSDQLRKIMEDRTKLPISSFKDVITSTLENHQVVLISGQTGCGKTTQVPQYI
LDHMWGKGESCKIICTQPRRISAISVAERISAERGEAVGDTVGYKIRLESKGGKNSSVLF
CTNGVLLRLLIGRGTNTSKARNWKRSLDDAILGITHIIVDEIHERDRFSDFMLTILRDLL
PVYPHLRLVLMSATIDAERFSQYFNGCSVIQVPGFTYPVKTFYLEDVLSILQSAGGNHLN
TTSDKKESNVLSDDFKSSMDDSINLALVNDEFDPLLELISAEQNTEVYNYQHSETGVTPL
IVFAAKGQLGDVCMLLSFGVDCSSQDHDGKSALDWAQQENQQEVCEVIKKHTECSSEKST
EDNELLNKYLATINPEHIDTLLIERLLGKICVDSNEGAILVFLPGWEDINQTRERLFASP
FFRDSSRFLVLSLHSMIPSSEQKKVFKHPPAGVRKIILSTNIAETAVTIDDVVFVIDSGR
MKEKSYDPYNNVSTLHASWVSKASARQREGRAGRCQPGTCYHLYSRFRASSLPDYQIPEI
KRMPIEELCLQVKLLDSNCRIADFLKKTLDPPIPETVRNAIAVLQDLGALTQDEQLTELG
EKLGSLPVHPSTTKMLLFAILMNCLDPALTLACAADYRDPFVLPIAPDERKRAAAARVEL
ASLYGGFSDQLAVVAAFDCWRRAKDRGQESQFCAKYFVSSNIMYMLSNMRKQLQNELSQR
GFVPADASACSLNSKDPGIMRAVLMAGAYPMVGKLLPPRKNARKTVVETASGAKVRLHPH
SCNFNLSFNKSSGKPLLIYDEITRGDGGMYIKNSSVVGSYPLLLIATEMVVAPPDDGSDD
EEEDSSEDEAEENTLVQHKEEIMSSPDSTVSVVVDRWLRFDATALDVAQIYCLREHLASA
ILFKVKHPQDVLPPALGASMYAIACILSYDGLPAMVPPNDLSANGGSGQNLAEASRFSQG
RAGYIPPSGFLMSLLADKTHPGGSSAHTRPSRAPVGRFDRSQRPFRNSGPGSSAPRSFKR
QRDAAR
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggtccacccgtctggcgtgcccgttcgtccgagctcgctgcgctaccccgccgtgtcg
cctcgctctaggttttccttcggcgcaccgcaacagcgcagcgtcaacagagcgaccgcc
gccgaggcgcgacaccgccggtccatccaaaccgcgctcgccgcatcgaaggggccctcc
caaccgccgagctcgcctctagacgacgacaacgggcacgaggacgaccggatggggagg
aaggggcggaaggggaagggcgcggcggccggggcagccgccgggggtagcggcggcatg
agggaggcgacgctggtgcgcgtctcaaaggtgctcgaggacttccgcgcctccaacgcc
gaggtgtacacatttgaacctgatatatccaaacaagagcgagctgcaatccatgagatg
tgtaggaaaacgggcatgatatccaaaagttctgggaatgggacaaagcgacgcctttct
gtttataaaagaaaacagaagcgggggcctgaaatggaagaaggccctagctaccttggg
ttttctgaagaggcaaggcatgttttgcaggatttatttatgcattaccctcctggtgat
gctgatttaaatggggattttgaccggaattctagtgataaggctgcaaacatcaaatgg
aaaacagatagtgcgttttgcaggccagcaatgagtaaacttgatataacgaagaaagtc
gagatgcttgcctctaaagtaaatggatccgaccagttgagaaagatcatggaagacaga
acaaaacttcctatttcatccttcaaggacgtcatcacttcaactttggaaaatcaccag
gtggttcttatttctggacaaacaggctgcggtaaaaccacccaggtgcctcaatacatc
ttggatcatatgtggggcaagggtgaatcatgtaagatcatatgcactcaaccacgtcgg
atatcagctatttcagttgccgagcgaatctctgctgaaagaggagaggctgttggtgac
accgttggatataagatacgtttggagtcaaaaggagggaagaattcatcagtcttgttc
tgcacaaatggcgttcttttgagattactgataggaagaggaactaacacttcaaaagca
cgaaattggaaacgctcattagatgatgcaattttgggaataacacacatcattgtggat
gaaatccatgaaagggataggttttctgatttcatgctgactattctaagagacttgttg
ccagtgtatcctcatcttcgtttggtactcatgagtgcaacaattgatgctgagcgtttt
tcgcaatatttcaatggatgttcagtcattcaagtccctggttttacctatcctgtcaaa
actttctatttggaggatgtgctttctattctacagtctgcgggtggtaatcatcttaat
actaccagtgataaaaaagagagcaatgttttaagtgatgatttcaaaagctcaatggat
gattcaattaacctggctttggtcaatgatgaatttgatcctctccttgagcttatttct
gcagagcagaacacagaagtctataattaccagcattcagagactggtgtaacaccttta
attgtttttgctgcaaagggtcagcttggggatgtctgtatgcttttatcttttggtgtg
gattgttcatcacaggatcatgatggaaaatccgcattagattgggcacaacaagagaat
caacaagaggtctgtgaagtaatcaagaaacatacggagtgtagttcagaaaaatcaact
gaagataacgagctgcttaataagtacttggcaactattaatccagagcacattgatact
ctgctaattgaacggttgcttggaaaaatttgcgtggattccaatgaaggagccatcttg
gtatttcttcctggctgggaagatatcaatcaaacacgtgaaaggttatttgcttctcca
ttctttcgggattcatcaagatttcttgtgttgtctcttcattctatgatcccgtcttcg
gagcagaaaaaagttttcaaacatccaccagcaggggttcgtaaaattattctctcaacc
aatattgcagagactgctgtgacaattgatgatgttgtgtttgtcatagatagtgggaga
atgaaagagaaaagttacgatccatacaataatgtgtccacacttcatgcttcttgggtt
tcaaaagccagtgcaagacaacgcgaagggcgtgctggccgatgtcagccaggaacttgc
tatcatctttactcaaggtttagagcatcatccttgccagactaccaaattcctgaaata
aaaagaatgcccattgaggaactttgtttgcaggtcaaactgcttgattcaaactgcaga
atagcagactttctgaagaaaaccttggaccctccaattccagaaactgtaagaaatgct
attgctgtgcttcaggatcttggtgctttaacacaagacgaacaactaacagaattagga
gaaaagctgggttccctgccagtccatccatccaccaccaagatgctcctgtttgctata
ttaatgaactgcctggatccagcattgacattggcatgtgcagctgattatagagatcca
tttgtccttccaatagcgccagatgagaggaaaagggcagctgcagcgagagttgagctt
gcttcattgtatggtgggttcagcgaccaacttgctgttgtggcggcatttgactgctgg
aggcgtgccaaagatagaggccaagaatctcaattttgtgcaaagtactttgtctcttca
aacatcatgtatatgctatcaaacatgaggaaacaacttcagaatgaactgtctcaaaga
gggtttgtccctgcagatgcatctgcctgcagcttaaattctaaagatccaggtatcatg
cgtgctgttcttatggctggtgcgtacccaatggtagggaaattgctccctcctcgcaaa
aatgctagaaaaacagttgtggaaacagcaagtggtgccaaagttcgtctgcacccacac
tcctgcaactttaacctatctttcaataaatcttctgggaagccgctgctgatatacgat
gagatcactcgaggtgatggtggaatgtatataaaaaattcttcagttgttgggtcatat
cctttgcttctaatagctacagaaatggttgttgctccacctgatgatggtagtgatgat
gaggaggaagattccagtgaggatgaagctgaggaaaacactttggtacagcacaaagaa
gagatcatgtcttcacctgatagcactgtttcagttgttgttgatcggtggctccggttt
gacgctacggctctggatgttgctcaaatatactgcttaagagaacatctagcatctgct
attcttttcaaagtgaaacatccgcaagatgttctaccgcctgcgcttggagcgtcaatg
tatgccatcgcatgcatcctttcatatgatggcttgcctgctatggttccaccgaatgat
ctttcagcaaacggaggttcaggccagaatttagcagaagctagcagattctctcaggga
agagcgggttatattccacctagtggttttctgatgtccttattagctgataagacccat
ccaggaggttcttcagcgcatactcggccatccagggctcctgttggtaggtttgatcga
tctcagcgtcctttccgcaattctggacctgggagttcagcaccacgttctttcaaaagg
cagcgcgacgctgcacggtga
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