Miscanthus floridulus: 136456724
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Entry
136456724 CDS
T10264
Name
(RefSeq) vacuolar protein sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
mflo Miscanthus floridulus
Pathway
mflo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136456724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136456724
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136456724
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
136456724
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136456724
Exosomal proteins of colorectal cancer cells
136456724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Flagellin_N
Vps36_ESCRT-II
Motif
Other DBs
NCBI-GeneID:
136456724
NCBI-ProteinID:
XP_066312764
LinkDB
All DBs
Position
6:complement(118615202..118619989)
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AA seq
446 aa
AA seq
DB search
MSAAAADWLPSASVTASGRPVLSAGEVERNLLPLADLEPEENPRLAPLRGCLLALTSHRL
IFLHEPSRSARGLPVATVVHAYPPHRRHGHNPLRSLFSSSSSSSSSQHPRIRLQISMPPA
RSEVIAIVVTCKADVDVFFGRLLEAIRARAWVVAPAAAPSSGTPVAEGASPAEDVAIRMP
VVGVSGILRMEQESWESAGQNLQDAFQDLNALMSKAKEMMQLAEKMRLKLLMNSSTESNS
NDEEMGSKQDMQDLLLSVGIVSPVTKETAGALYHQQLSLQLADFVRIPLEKAGGMMALVD
VYCLFNRARGTELISPEDLLQACSLWEKVDVPVMLRKFDSGVKVIQTKTHSDEEVFARIS
SLAQKPDALQKGISPSDAAFTLGIAPALAKEHLLNAENKGLLCRDVSPDGFRFFINLFNE
IDAQNIYSQKPHGLYSAWISIAMASN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgccgcagccgactggctcccgtcagcgtccgtaacggcgtccggccgcccg
gtgctttccgcaggcgaggtggagcggaatctcctcccgctcgccgacctcgagcccgag
gagaacccgcgcctcgcgcccctccgcggctgcctcctcgcgctcacttcccaccgcctc
atcttcctccacgagccgtcccgctccgcgcgcggcctcccggtcgccaccgtcgtccat
gcctaccctccccaccgcaggcacggccacaaccccctccgctccctcttctcctcctcg
tcctcatcttcctcgtcgcagcatccccgcatccgcctccagatctccatgccgcccgcg
cgatcggaggtcatcgccatcgtcgtgacatgtaaggctgacgttgatgtgttcttcggg
aggctgctcgaggcgatccgtgcaagggcttgggtggtggcccccgcagctgctccgtcg
agcggcacgccggtggcagagggggcctcgcctgcggaggacgtcgcgatccggatgccc
gttgttggggtctcggggatactgcggatggagcaggagtcatgggagagcgccgggcag
aacttgcaagatgcgttccaggatctcaatgccctcatgagcaaagctaaggaaatgatg
cagttagcagagaaaatgaggctcaagctattaatgaactcatctactgaatcaaattcc
aatgatgaagagatgggttctaagcaagacatgcaggacttgctattgagtgttggcatt
gtgtctcctgtgaccaaagaaactgctggtgcgttgtatcatcagcagctgtcactacag
ctggcggacttcgtaagaataccgcttgagaaagcaggtggtatgatggcactagtcgat
gtttattgtctcttcaaccgtgctaggggaacagagttaatctcaccagaggaccttttg
caagcttgttcgctgtgggagaaagttgatgtcccagtcatgctcaggaaatttgatagt
ggagtgaaggtgatccagaccaagacacatagtgatgaagaggtatttgcaagaatctca
tcacttgcacagaagccggatgctcttcagaaagggattagcccaagtgatgccgcattc
acactgggaattgctccagctttagcaaaggaacatcttctaaatgcagaaaacaaaggc
ctgctgtgcagagatgttagtccagatggattccgcttttttatcaatttatttaatgaa
attgatgcccaaaatatttactcgcaaaaaccccatgggctgtacagcgcgtggatctcc
attgcgatggcatctaactga
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