Miscanthus floridulus: 136457147
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Entry
136457147 CDS
T10264
Name
(RefSeq) DNA mismatch repair protein MLH1-like isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
mflo Miscanthus floridulus
Pathway
mflo03430
Mismatch repair
mflo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
136457147
03460 Fanconi anemia pathway
136457147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136457147
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
136457147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
136457147
NCBI-ProteinID:
XP_066313287
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All DBs
Position
6:141187778..141199421
Genome browser
AA seq
726 aa
AA seq
DB search
MDVDDPSPRVGGGSGADPPRIRRLEESVVNRIAAGEVIQRPSSAVKELVENSLDAGASTV
SVTVKDGGLKLIQVSDDGHGIRFEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEALASM
TYVGHVTVTTITEGQFHGYRVCYKDGVMENEPKPCASVKGTQVMVENLFYNMVARRKTLQ
NSNDDYPKIVDFISRFAVHHINVNFSCRKHGANRADVHSSSTSSRLDAIRNVYGASVVRD
LIEIEVSDEDAGDAVFKMDGYISNANYVAKKIMMILFINDRLVDCTALKRAIEFVYSATL
PQASKPFIYMSINLPSEHVDVNIHPTKKEVSLLNQERIIETIKNTIEEKLRNSNTTRIFQ
TQLQAVNSSALTQVYTQKDKGTEVKMASGMKSQKTPVSQMVRTDPRNPSGRLHTYWHGQS
SNLEKKSDLVSVRNVVRSRRNPKDACDLSSRHELLMEIDSHCHPGLLEVIKNCTYVGLAD
EVFALIQHNTHLYLVNVVNVSKELMYQQALCRFGNFNAIQLSEPAPLQELLLIALKDDEL
IGDENDEKLEIAEVNSKILKGNAEMINEYFSIHVDQDGNLTRLPVVLDQYTPDMDRLPEF
VLTMGNDVTWDDEKECFRTAAAAIGNFYALHPPILPNPSGSGVQLYKKNKDCMASGEHVD
STDEDDIDHELLAEAETAWSQREWTIQHVLFPSIRLFLKPPKSMATDGTFVQIASLDKLY
KIFERC
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgatgacccgtcgccgcgcgtcggcggaggcagcggcgcggacccgccccgc
atccggcggctggaggaatcggtggtgaaccgcatcgcggcgggggaggtgatccagcgc
ccgtcgtcggcggtcaaggagctcgtcgagaacagcctcgacgccggcgcgtccacggtc
tccgtcaccgtaaaggacggagggctcaagctcatacaggtttccgacgacggccacggc
atccggtttgaggatttgccaatattgtgcgaaaggcatactacctcaaagttatctgca
tatgaggatttacagaccataaaatctatgggatttagaggggaggccctggccagtatg
acttatgtcggccatgttactgtgacaacaataacagagggccaatttcacggctatcgt
gtttgttataaagatggagtaatggagaatgagccaaaaccctgtgcttcagttaaagga
actcaagtcatggttgaaaatttattttacaatatggtagctcgtagaaaaacattgcag
aactccaatgacgactaccccaagattgtagatttcattagtcgttttgcagtccatcac
atcaatgtgaacttttcctgcagaaagcatggagccaatagagcagatgttcatagttcg
agcacatcttctagactggatgctataaggaatgtctatggggcttctgttgttcgtgat
ctgattgaaatagaagtttcagatgaggatgctggagatgcagtcttcaagatggatggt
tatatatcaaatgcaaattatgtggcaaagaagatcatgatgatccttttcataaatgat
aggcttgtagactgtaccgctttaaaaagggcaattgaatttgtgtactctgcaacgttg
cctcaagcatccaaacccttcatatacatgtccatcaatcttccgtcagaacatgtggat
gtcaatatacacccaaccaaaaaagaggttagcctcttgaatcaagagcgtattattgaa
actataaaaaatacaattgaggaaaagctgaggaattctaataccacaaggatattccaa
actcagttgcaggcagttaactcctcagcacttactcaagtttacacacagaaggacaag
ggtactgaggtcaaaatggcctctggaatgaaatctcaaaagactcctgtgagccaaatg
gtcagaactgatccacgcaatccatctggaaggttgcacacttactggcatgggcaatct
tcaaatcttgaaaagaaatctgaccttgtttctgtaagaaatgttgtaagatcaaggagg
aatccaaaggatgcttgtgatctatctagccgtcatgagcttcttatggaaatagattct
cactgccatcctggtcttttagaggtcattaagaattgcacatatgttggcttggctgat
gaagttttcgctttgatacagcacaatactcacttataccttgtcaatgttgtaaatgtt
agtaaagaactcatgtaccagcaagctctgtgccgttttggaaacttcaatgctatacag
cttagtgaaccagctcctcttcaggagctgctgctgatagcactgaaagatgatgaatta
atcggtgatgaaaatgatgagaaactggagattgcagaggtaaactcgaagatactgaaa
ggaaacgctgagatgattaatgagtacttctctattcacgttgatcaagatgggaacttg
accaggcttccagttgtacttgatcagtacacccctgatatggatcgtctcccagaattt
gtgttgactatggggaatgatgttacctgggatgatgagaaagagtgcttcagaacggca
gcagctgctattgggaacttctacgcactccatcctcccatccttccaaatccatcaggg
agtggcgttcagttgtacaagaaaaataaagattgcatggcgagtggcgaacatgttgat
agtacagatgaagatgacattgatcacgaactacttgcggaagcagagacagcatggtcc
caacgcgagtggaccattcagcatgtcttatttccatccattcgacttttcctcaagccc
ccaaagtcaatggcaacagatggaacctttgttcagattgcttctctggacaaactttac
aagatttttgagagatgttag
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