Miscanthus floridulus: 136457234
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Entry
136457234 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136457234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136457234
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136457234
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
136457234
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
136457234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
mS26
Motif
Other DBs
NCBI-GeneID:
136457234
NCBI-ProteinID:
XP_066313391
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All DBs
Position
6:144410547..144415092
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AA seq
564 aa
AA seq
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MRPFHPPRPNLNQHHRARPGGDPGRPHLPGTHMHPAFPPPVPNLAAAANPMAAAAAANPF
LALQLLGQAQHLQNLGFLAAAALQQQQQAPFFPGGFPANPNQFAPFAGGPPPAGFNGGGA
FRPGGPGFCGPRPPSPMMSHAGNGPNNNNSAGSGGSSRPILNVGRKDHNSKAGSGGTPGP
IIDVGRKDQNSSAGGNGEVYHFENKAAGSISNFASESGNKITDQKSGFSTGRDGRGGRQF
GAFRGRGRGRHPNQSHGRGSNNLGEIKSNFMGHKSSASGHCSDIPAPASGGRRKPPPIIY
DANEVKRWVEARKKNYPTSVNVNKKLSEIKSDDENKDKDAQLRRQELKEVLAKQQELGFD
LPELPPGYLSDTGDQCIENKNSRKTQCRDSHFGNRFNNNKRPRYERGGFQSKRSKVWNRT
PRADDAMAKSREPTLLQKLLSSDIKRDRRRLLQVFKFMTLNNFFKDWPNKPLQFPSVKVN
QIEIGSNIGTDDLENAEMANGSILGVNENGDWKELCSIDEEDTDSANHNDEDDGGVSADS
SIEDGLEEDAYEEQFNEPEDDTAV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccttccaccctccccgccccaacctcaaccaacaccaccgcgcacggcccggc
ggcgacccgggccggcctcaccttcccggtacccacatgcaccccgccttcccgccgcct
gtccccaacctcgccgccgccgccaaccccatggctgcagcggcggcggccaaccctttt
ctggcgctgcagctcctcggccaggcccagcacctccagaatctcggtttcctcgccgcc
gccgcgctccagcagcagcagcaggcgccgttctttcccggagggttcccggcgaacccc
aatcagtttgcgcccttcgcgggcggcccgccgcctgccggtttcaatggcggcggggcc
tttcggcctggcggtcctgggttttgtggcccgcggccacccagtcccatgatgagccat
gcggggaacggtcccaacaacaacaacagcgctggaagcgggggatcgtcgaggccgatt
cttaacgttgggaggaaggaccacaacagcaaagctggcagcggtggcacgccggggccg
attatcgacgttgggaggaaggaccagaatagcagtgctggcggcaacggcgaggtgtat
cactttgagaataaagcagctggcagcatatctaattttgcctctgaaagtgggaacaaa
ataacagatcagaaatcaggatttagcactggaagagatggtagaggtggcaggcaattt
ggtgcatttagagggaggggcagaggaaggcaccctaatcaaagtcatggaagaggaagc
aacaacttgggagaaataaaatcaaacttcatgggccacaaaagttcagcatcaggacat
tgcagtgatattccagctccagcatctggaggacgacgaaagccccctccaataatttat
gacgcaaatgaagttaaacgatgggtagaggcacgaaagaagaactaccctacaagtgtc
aacgtaaataagaagttgtctgagataaagtcagatgatgaaaacaaggacaaagatgcc
cagctacgacgtcaggagctgaaggaagtcctagcaaagcagcaagaactgggttttgac
ctacctgagctaccacctggctatctatcagacactggggatcaatgcatcgaaaataaa
aatagtaggaaaactcaatgcagggattcccattttggaaatcgtttcaataataacaaa
agaccaaggtatgagcgtggaggttttcagtctaaaagatctaaggtatggaaccgtact
cctcgcgctgatgatgcaatggccaagagcagagaaccaaccctcctgcagaagcttctt
agttctgatatcaagagggatagacgtagacttctccaggtgttcaaattcatgaccttg
aacaatttctttaaggactggcctaataagcctctacagtttcctagtgttaaggtgaat
cagattgaaataggaagtaatattggtacagacgacttggagaatgccgagatggccaac
ggcagcatccttggtgtaaacgaaaatggtgattggaaagagttgtgctcgattgatgaa
gaagatactgatagtgccaaccacaacgatgaagacgacggtggtgtcagtgctgacagc
agcattgaggacgggctcgaggaggatgcgtacgaagagcaatttaatgagcctgaagat
gataccgcagtctga
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