Miscanthus floridulus: 136457803
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Entry
136457803 CDS
T10264
Name
(RefSeq) DNA damage-binding protein 2-like
KO
K10140
DNA damage-binding protein 2
Organism
mflo Miscanthus floridulus
Pathway
mflo03420
Nucleotide excision repair
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136457803
09124 Replication and repair
03420 Nucleotide excision repair
136457803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136457803
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136457803
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
136457803
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
136457803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
30K_MP_C_Ter
CSRNP_N
Motif
Other DBs
NCBI-GeneID:
136457803
NCBI-ProteinID:
XP_066313906
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All DBs
Position
6:20128518..20132898
Genome browser
AA seq
580 aa
AA seq
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MGPTTRAHFVYNRRRRRRRGGKHAVEGASEEEEQRVDSSSSSSDEEGDEEEDAEASGEDV
DDEEEEESVAVEPAAKQSSAAAAAGEKRGGRKDQISISLKKVCKVCKRTGHQAGFQGAVY
IDCPMKPCFLCKMPGHTTLTCPHRAAMEHGVIPAPRRNTNTSLDYVFQSQVKGKISMVKP
KFLIPNQLECGNIKFHQRRVTCLEFHPTKNNVLLSGDKKGLLVIWDYVKLHEKITYDSVH
SCILNSMKIDTTNDGMVYTASSDGTISFTDLDTGIGFPLLNLNPNGWNGPSSWHMIYGMD
LNTDKGLLLVADNFGFLYFLDRRSKTRIGHPILIHKKGSKVTSLHCNPARPEVLLSSGND
HYARIWDTRKLEANSPLAGLAHGRVVNSGYFSPRSGNKILTTCQDNRIRVWDYILGDLQS
PSREIVHSHDFNRHLTPFKAEWDPKDYTETVAVIGRYISENYNGVALHPIDFIDTSSGKL
LAEVMDPDITTISPVNKLHPQDDILATGSSRSIFIWKPKTEDELAEERAKQKDQGGSSSR
KKANGNSSDDDSDGDSGGKNRKAKKTRFTHAVKGKGKSKV
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgggccccacaacccgcgcccacttcgtctacaatcgccgccgccgccgccgccgaggc
gggaagcacgccgtcgagggggcttctgaggaggaggagcagcgggtggatagctcctcc
tcatcctccgacgaagaaggagatgaggaagaagatgccgaagcgtccggagaggacgtc
gatgacgaggaggaagaggagtcggtcgctgtcgagcctgcggccaagcagtcatccgca
gctgcggcggcgggggagaagaggggcggaaggaaggaccagatcagcatcagcctcaag
aaagtgtgcaaggtgtgcaaaaggacagggcaccaggcagggttccagggggctgtgtac
atcgactgccccatgaagccttgcttcttatgcaagatgccaggtcatacaaccttgact
tgcccacatagagcagcaatggagcatggggtcatcccagcccctagaaggaatacaaac
acttcactagattatgtctttcagagccaagtcaagggcaagatttccatggttaagcct
aagtttctgatacccaaccaactagagtgtggaaacataaaatttcatcagaggcgtgtg
acatgcttggagtttcatccaactaagaacaatgttcttttatcaggagacaagaaaggg
cttctggttatctgggattatgttaagttgcatgagaagattacatatgattctgtgcac
tcctgcattctgaatagcatgaagattgataccaccaacgatgggatggtatatacagct
tcctctgatggtactatcagttttaccgatttggacactggcattggcttccccttgtta
aatctcaacccgaatggttggaatggtccaagctcttggcacatgatatacgggatggac
ttgaacactgacaaaggtcttcttttggtggcagataactttggttttctttacttcctg
gatagacggtcaaagacaagaattggacatccaattcttatccataaaaagggtagtaag
gtaaccagcctacattgcaaccctgcacgacctgaagttcttctaagcagcggaaatgat
cactatgcccgaatttgggatacaaggaagcttgaagccaactctccccttgccggcctt
gctcatggacgggttgttaattcaggatacttttctccacgaagcggaaataagatcttg
acaacttgtcaggacaaccgaattcgtgtatgggactatattcttggtgatctgcaatcc
ccaagtagagaaattgtgcacagtcatgatttcaatcgtcatctgactcccttcaaagct
gagtgggatccaaaggattacactgaaacagttgcagttattggccgttacataagtgag
aactacaatggtgttgctctgcatccaattgatttcatagataccagttctgggaagctt
ctggctgaggtgatggaccctgacataacaaccatcagcccagtgaacaagctacatccg
caagatgacatcctagctacaggaagctcaaggtctattttcatttggaaaccaaaaact
gaagatgaacttgctgaagaaagggccaaacagaaagaccaaggaggatcaagttcccgg
aagaaagcaaatggcaatagtagtgatgacgactcagatggcgattctggcggaaagaac
aggaaagcaaagaagactcgcttcactcatgcagtaaagggaaagggcaaatccaaagtt
tga
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