Miscanthus floridulus: 136457865
Help
Entry
136457865 CDS
T10264
Name
(RefSeq) uncharacterized protein isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136457865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136457865
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136457865
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136457865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
136457865
NCBI-ProteinID:
XP_066313969
LinkDB
All DBs
Position
6:23826738..23835468
Genome browser
AA seq
335 aa
AA seq
DB search
MYRYPMISPKERAAQRALSINRSRTGHGAFAVASVFKRMSKRGPQMGGKRPRQQVPPPRA
ATKGPRLQAETLAETSQHQAGAKITVAINANLLKCCVCFGPLTPPIFQCTKGHVSCSRCC
TGYQDDEVECLMCREPEKATRCRAMEHILGGLHVPCPFRQHGCAEMIPYTSELAHKALCV
HAPRHCPISGCAGYVGKPLREHVRQDHPGVVRTVVSPRCLRPLRMRAHEQARVVRLSDSD
GDGGGGGGAEFLVVVGQYKDLGRALSVVHLVDESVDEQDFKHRIEVVGKAGVLSLSGETL
DAERLAEPYEASPFLFVPNETWDSPEGIRVFIELK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttatccaatgatctcacccaaggagagagcagcacaacgcgcgctttccatc
aacagaagccggacaggccacggggcgtttgcggtcgcctccgttttcaagaggatgagc
aagagaggcccgcagatgggtgggaagaggccaaggcagcaggtgcccccgccacgcgcc
gcgacaaaaggccctaggctgcaggctgagaccctagctgagacaagccaacaccaagca
ggggcgaagatcaccgtcgccatcaatgccaacctgctgaagtgctgtgtatgcttcggt
ccattgacgccgcccattttccagtgcacgaaaggccacgtctcatgctcaaggtgctgc
accgggtatcaggatgacgaggtcgaatgcctcatgtgccgtgagccagagaaggccacc
cgctgccgcgccatggagcacatcctgggcggcctgcacgtgccatgcccgttccggcag
cacgggtgcgccgagatgatcccctacacctcggagctagcccacaaggcattgtgcgtc
cacgccccgcgccactgccccatctctggttgcgcgggctacgtcggcaagcccctgcgc
gagcacgtccggcaagaccaccccggtgtggtccgcacggtcgtctcgccacgctgcctc
aggccgctgaggatgcgcgcgcacgagcaggcccgcgtggtgaggctcagcgacagcgac
ggcgacggcggcggcggcggcggcgcggagttcctggttgtcgtcggacaatacaaagat
ttggggcgcgcgctgtcggtggtgcacctcgtggatgagtctgtggacgagcaggatttc
aagcacaggatcgaggtggtcggcaaggctggcgtcctttcgctgtccggtgagaccctg
gacgctgagcggctggcggagccgtacgaagcgagcccgttcctgttcgtccccaacgag
acctgggactctcccgagggcatccgcgtgttcatcgagctgaaatga
DBGET
integrated database retrieval system
