Miscanthus floridulus: 136457869
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Entry
136457869 CDS
T10264
Name
(RefSeq) uncharacterized protein isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136457869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136457869
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136457869
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136457869
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
136457869
NCBI-ProteinID:
XP_066313979
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All DBs
Position
6:23913197..23916047
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AA seq
320 aa
AA seq
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MISPKERAAQRALSINRSRTGHGAFAVASVFKRMSKMGGKRPRQQVPPPRAATKGPRLQA
ETSQHQAGAKITVAINANLLKCCVCFGPLTPPIFQCTKGHVSCSRCCTGYQDDEVECLMC
REPEKATRCRAMEHILGGLHVPCPFRQHGCAEMIPYTSELAHKALCVHAPRHCPISGCAG
YVGKPLREHVRQDHPGVVRTVVSPRCLRPLRMRAHEQARVVRLSDSDGDGGGGAEFLVVV
GQYKELGRALSVVHLVDESVDEQDFKHRIEVVGKAGVLSLSGETLDAERLAEPYEASPFL
FVPNETWDSPEGIRVFIELK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgatctcacccaaggagagagcagcacaacgcgcgctttccatcaacagaagccggaca
ggccacggggcgtttgcggtcgcctccgttttcaagaggatgagcaagatgggtgggaag
aggccaaggcagcaggtgcccccgccacgcgccgcgacaaaaggccctaggctgcaggct
gagacaagccaacaccaagcgggggcgaagatcaccgtcgccatcaatgccaacctgctg
aagtgttgtgtatgcttcggtccattgacgccgcccattttccagtgcacgaaaggccac
gtctcatgctcaaggtgctgcaccgggtatcaggatgacgaggtcgaatgcctcatgtgc
cgtgagccagagaaggccacccgctgccgcgccatggagcacatcctgggcggcctgcac
gtgccatgcccgttccggcagcacgggtgcgccgagatgatcccctacacgtcggagcta
gcccacaaggcattgtgcgtccacgccccgcgccactgccccatctctggttgcgcgggc
tacgtcggcaagcccctgcgcgagcacgtccggcaagaccaccccggtgtggtccgcacg
gtcgtctcgccgcgctgcctcaggccgctgaggatgcgcgcgcacgagcaggcccgcgtg
gtgaggctcagcgacagcgacggcgacggcggcggcggcgcggagttcctggttgtcgtc
ggacaatacaaggagttggggcgcgcgctgtcggtggtgcacctcgtggatgagtctgtg
gacgagcaggatttcaagcacaggatcgaggtggtcggcaaggctggcgtcctttcgctg
tccggtgagaccctggacgctgagcggctggcggagccgtacgaagcgagcccgttcctg
ttcgtccccaacgagacctgggactctcccgagggcatccgcgtgttcatcgagctgaaa
tga
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