Miscanthus floridulus: 136459953
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Entry
136459953 CDS
T10264
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
mflo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136459953
03015 mRNA surveillance pathway
136459953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136459953
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136459953
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
136459953
NCBI-ProteinID:
XP_066315899
LinkDB
All DBs
Position
6:141212929..141218406
Genome browser
AA seq
426 aa
AA seq
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MAKPRRGRSASRSSSGSSSRSPSHSVSSGSVSSRSRSRSRSFSSSSSQARSRSPPPAKRS
SPGARKGRSPSPPPKKGSPSKKVRSPSPPPKKASPPRKASPPAESAVLCIDHLSRNVNEA
HLKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRADAEKALLYMDGGQIDGNVVKLR
FTLQPRQRAASPIKAPPPPPKRDAPQIEKGVSSAEKDAQQRPRESSPRRKPASPPRKRSP
NRRAESPRRPPDPSPRRRPDSPPIRRRPDPSPVRRGDTPPRRRPLSPVRRRSPSPPPRRH
RSPMRPSPRRGRGSPSPRRRSPGPLRRRSPPPRRLRSPPRRPPPPRRSPPRRPLRSRSRS
ISPRRGRGPPLRRGRSDSSYSRSPTPPPRKGPRRVSRSRSPRRPPRGRSISSDSRSSSSP
SPRRGR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctcggcgcggccgctccgcgtctcgctcctcctcgggctcttcctcccgc
tcgccgtcccactccgtctcctccggctccgtctcgtcccgctcccggtcgcgctcccgc
tccttctcgtcgtcgtcctcgcaggcccggagccgctcccctcctccggctaagcgcagt
tcgcctggagcacgaaaaggccgatcaccttcgccgccccctaaaaagggctcaccctca
aagaaagtccgttcgccatcaccaccacctaaaaaggcttcaccccctaggaaagcgtca
cctcctgctgagtcggctgttctctgcattgatcacttatcaaggaatgttaatgaggct
cacttgaaagagatatttggaaactttggcgaagttgtgaatgtggagctatcaatggac
cgaatggttaaccttcctcgtggctatggatatattgaattcaagaagagagctgatgct
gagaaggctcttctttacatggatggtggtcaaattgatgggaatgttgttaagttgaga
ttcactcttcaaccacgccaaagggctgcatcacctataaaagctccgccccctcctcca
aaaagagacgctccccagattgaaaaaggtgttagcagtgctgaaaaggatgcccagcag
cgtcctagggaatcatctccacgaaggaagccagcttcacctccacggaaacgatctcca
aatcgaagggctgaatcacccaggcgtccacctgacccatcacctaggcgtcgtcctgat
tctccgcctattcgtcgccgaccagatccttctcctgtcaggcgtggtgacacgcctcct
cgcaggagaccactatctccagttagaaggcgctctccttctccaccacctaggaggcat
aggtcaccgatgcgtccttcacctaggaggggacgtggcagcccatcaccacgcaggcgc
tcccctgggcctcttaggcggcgctcgccacctccaaggcggttgaggagcccaccaaga
aggccaccacctccacgtcgctctcctcctcgccgaccccttcgctcccgctccagatca
atttctccaagaaggggacgagggcctccgttgaggcgtggtaggtcagactcatcatat
tctcgatcacctactccacctccaagaaagggtccaagaagggtatcaaggagccgcagc
cctagaaggcctcctagaggaagaagcatctctagtgacagccgaagcagcagttcacct
tcccctagacgcggcaggtag
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