Miscanthus floridulus: 136460351
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Entry
136460351 CDS
T10264
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136460351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136460351
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136460351
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136460351
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_3
DUF3373
ZnF_RZ-type
Motif
Other DBs
NCBI-GeneID:
136460351
NCBI-ProteinID:
XP_066316184
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All DBs
Position
6:23337444..23347721
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AA seq
288 aa
AA seq
DB search
MAMKSSEPVVQWARPPGPSRPKPSRKAMDLELDVFECPICLSIFEGSIFQCENGHVVCDA
CSVHIHGTCPSCREPVGDIRCRALENVIAAMALPCSFRSHGCTQLLKHTERRDHEAFLCQ
HAPFECPFQGCAYSGLLLYDHIHDAHTIDYVVSFARSAWWVWLRRSWPFMVLLDQVDRRV
FLLLNGGDVRSGRSLPVVCLGPRPASNELLEYKQEVGGAGEPGALWLSASGSVPCMRSWA
GQHPTDGFLFVPDAYWTSFNSVFVNVHLSRGRRRSTPRLTGSGSIRFC
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaagtcgtcggagccagtggtccagtgggccagaccccctggtccgagccgg
cccaagcctagtcgtaaggcaatggatctggaactggacgtgtttgagtgccccatctgc
ctctccattttcgaaggatccatcttccagtgcgagaacgggcacgtcgtatgcgatgcc
tgcagcgttcacatccacgggacttgcccgtcctgccgcgagcccgtcggcgacatccgg
tgccgggcgctggagaatgtcatcgccgccatggccctcccctgctcgttcaggagccac
gggtgcacgcagctgctcaagcacaccgagaggcgggaccacgaggcgttcctctgccag
cacgcgccgttcgagtgcccgttccaagggtgcgcctactcggggctgctcctctacgac
cacatccacgacgcgcacaccatagactatgttgtcagcttcgccaggtccgcgtggtgg
gtgtggctgcgccggagctggccgttcatggtgctcctggaccaggtggaccggcgagtg
ttcttgctgctcaacggcggggacgttcgctcgggtcgttcgctgccggtggtctgcctc
ggcccgcgccccgcgtccaacgagttgctagagtacaagcaggaggtgggcggcgccggt
gaacccggcgcgctctggctgtcagcatcgggctccgtgccctgcatgcgcagctgggca
gggcaacaccctaccgacgggttcctgttcgtgccggacgcgtactggacctccttcaac
tccgtcttcgtcaacgtccatttgtccagaggtcgtcggcggtcgacaccacgcctcacg
ggatcgggaagcattcgattttgttag
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