Miscanthus floridulus: 136461350
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Entry
136461350 CDS
T10264
Name
(RefSeq) autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
mflo Miscanthus floridulus
Pathway
mflo04136
Autophagy - other
mflo04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
136461350
04136 Autophagy - other
136461350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136461350
03029 Mitochondrial biogenesis [BR:
mflo03029
]
136461350
Membrane trafficking [BR:
mflo04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
136461350
Others
Specific organelles associated proteins
Auto phagosome
136461350
Mitochondrial biogenesis [BR:
mflo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
136461350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
EIF3I
WDR55
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ATG16
DSE1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
CFAP251_N
Beta-prop_WDR41
Beta-prop_NOL10_N
Beta-prop_ACSF4
ASA1
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_Aladin
Beta-prop_DCAF4
ODF2_N
WD40_like
Beta-prop_Nup120_160
Beta-prop_RIG_1st
Beta-prop_DCAF12
Med16_N
DUF6923
Invas_SpaK
Small_EgtBD
Mis12
Motif
Other DBs
NCBI-GeneID:
136461350
NCBI-ProteinID:
XP_066316799
LinkDB
All DBs
Position
1:25095869..25098678
Genome browser
AA seq
507 aa
AA seq
DB search
MTMAEAEAGRAAIRRALRSLKRRHLAEEGAHSPAIEALTRPFAAHALEWKERAEKHELEL
QHCYKAQSRLSEQLVIEIEEGKASKALLKEKEAMVTSLQAELEKTSEENVQLKQSLDEKT
KALDLLIQEHQTVKAELEQALAKLKAAEDENQSLIDRWMLEKMKDAERLNEANAMYEEMV
LKLKTAGVGGIQLNAQQEADGIIRRSEAGYMETSIPSTCTITIRAHDGGCGSLMFEHNSD
KLISGGQDQTVKIWSASTGALTSTLHGCLGSVNDLAVTNDNKFVIAACSSNKLFVWEVNG
GRPRHTLTGHTKNVSSVDASWVKSFVVASSSNDRTIKTWDLQTGFCKSTIMSASNPNSLA
FIDGDIICSGHRDGNLRLWDIRSGKCTTQIAAHLDVTSVCVSRSKNFILTSGRDNVHNLF
DVRTLEICGTFRAMGNRAVGSWGKPCISPDENCIAAGSSDGSVYIWSRLKNGTPTILEGH
SSPVLASAWCGLGPLATSDRNHIYLWS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggccgaggccgaggctggtagggcggcgatccggcgcgccctgcggtcgctg
aaacggaggcacctcgccgaggaaggggcgcacagcccggccatcgaggcgctaacccgt
cccttcgccgcccacgctttggagtggaaagagagggctgagaagcatgagttggagctg
cagcactgctacaaggcacaatcccggctctctgagcagcttgtaatcgagatagaagaa
ggtaaagcatcaaaagcactgctcaaagagaaggaagctatggttacaagtttgcaggct
gaacttgagaagacgagcgaagagaatgtacaactaaagcagtcacttgatgaaaaaaca
aaagccttagatcttctcattcaagagcatcagacagtgaaagccgaacttgaacaagca
ttggcgaaactaaaagctgcagaggatgagaaccaaagtctgattgatcgatggatgcta
gagaagatgaaagacgcagagaggctcaacgaggccaatgcgatgtatgaggagatggtt
ctaaagctaaagacagctggagttggtggtatacaacttaatgcacagcaagaagctgat
ggcatcatacggcgttctgaagctggttacatggaaacatcaatcccgtcaacatgcaca
ataactattcgtgctcatgatggtgggtgtggatccttgatgtttgagcataactcagac
aagctaattagtgggggtcaggatcaaactgttaagatatggagtgcatctactggtgcc
ttgacctccaccctacatggttgcttggggtctgttaatgatcttgccgtgaccaatgat
aacaagtttgtgatcgctgcttgtagctccaataagctatttgtgtgggaagtcaatggg
ggacgtcctcgtcacactctgactggtcacaccaaaaatgtttcatctgttgatgcaagc
tgggtgaagagctttgttgttgctagttcatccaatgatcgtactatcaagacttgggat
ttacagacaggtttctgcaaaagcaccataatgtctgcaagcaaccccaactcactagct
ttcattgatggtgacatcatttgttcgggccatagggatggaaatcttcggctatgggat
atccgtagtgggaaatgcactacacagatagctgctcatcttgatgtcacctcggtctgt
gtgtcacggagcaaaaattttattcttacaagtgggagagataatgtgcacaaccttttt
gatgttagaacattggagatttgtggaacattcagggccatgggtaacagagcggtgggc
agctggggcaaaccttgtattagccctgatgaaaattgcattgctgctggttcttctgat
ggatctgtttacatatggtctagactgaagaatggaacaccgaccatcctagagggtcat
tcttcacctgttctcgcaagtgcatggtgcggactaggacctcttgctacctcggacagg
aatcatatttatctctggtcttga
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integrated database retrieval system
