Miscanthus floridulus: 136461487
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Entry
136461487 CDS
T10264
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136461487
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
136461487
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
136461487
NCBI-ProteinID:
XP_066316847
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Position
6:complement(1003448..1008348)
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AA seq
716 aa
AA seq
DB search
MASRMTPSKRPFQKNSSDFNGRGKWLKTKHSSPHKSQFKIEPGVPIFRILCPASKSGNVI
GKGGAIIAKIREETRMRIRVDRAAPGCDERVIFITAVDKDEEASSERGGENDGGVAASTG
GDLERDKDNSKEENDDPEGNNSKEQNDDSEKGNGKEEEGSFEKDHSTEEKDDSEKDHIRE
EKDHSEKEHDKEEKDDPFVTEVTKSEPERVIPSALKAVSLVFDRIFAAEDNNETGNLSAA
STPVNLRLLVLYSQAGWLLGKGGSVIKQMSADNGCEIRVLRDNLPSCALLNDKLCQITGE
IDSVRKGLNAVSELLLAHPPKETDAVAGVHSSGSSSRSLFNQSDGLPSGMQSNFHIPSQG
PSQANGPFDIIDLQPPIHGHASVPIESLSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCE
IKVLDTVPKTDDRIISISGPAHPSDGISPAQNAILHVQRKIMLPTSDKKEGPAICRMIVS
ANQVGCVLGKGGSIIAEMRKLSGAFIVVLSKDKIPRGVPEHDEVIQISGSCEAIQEALMQ
ITARLRNHLFRVDRMPAMGPNMRPPFGLLDSQFGPFVGNHESPSLFHKDFMGRPLDGISA
PWTVKGLRDLSDPVSISDIPGAGQREAGGFSGPGQPSMMPNLTAEVLVPRLIIPSLCGED
GGCLDRIREFSEAKITVAEPFVDSMDTAVLISGTPDQMHAARSLVQAFVMSESFAP
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacgcatgacaccttccaagaggccgtttcagaaaaattcttcagacttcaat
ggacggggcaagtggctgaagacgaagcattcttctccacataaatctcagttcaaaatt
gagcctggtgttcccatttttcgtattctctgcccagcttcaaaatctggtaatgtaatt
ggcaaaggaggtgccatcattgcaaagatacgggaagaaactagaatgagaatcagggtt
gatagagcagcccccggttgtgatgagagagttattttcataactgctgtcgacaaggat
gaagaagctagcagcgagcgaggcggagagaatgacggaggtgttgctgcttctactggt
ggtgaccttgagagggataaagataacagcaaggaggaaaatgatgatccagagggaaac
aacagcaaggagcagaatgatgattcagagaaaggaaacggtaaggaagaagaaggcagt
ttcgagaaagaccacagtacggaagaaaaggatgattcagagaaagaccacattagggaa
gagaaggatcattcagagaaagaacacgataaggaagaaaaggatgatccttttgttaca
gaagttacaaagtcagaaccagagagggtaataccatcggcactgaaggccgtttcgctt
gtcttcgataggatttttgcagctgaagataataatgaaactgggaatttgtcagctgca
agcactcctgttaatttgcgattgttggttctgtacagccaagcaggttggctcttgggt
aagggtggtagtgtgattaaacaaatgtcagctgataacggctgtgaaatccgtgttttg
agagacaaccttccatcatgtgcattattgaatgacaaactttgccagatcactggagag
attgactcagtaaggaaaggtctcaatgctgtatctgaattgctcttagctcatccaccc
aaggaaactgatgcagttgctggtgttcattcttctggatcatcatcacgttctttgttc
aaccagtctgatggtcttccttcaggaatgcaatctaacttccatatcccttcgcaaggg
ccatcccaagccaatggaccttttgatatcattgatcttcaacctccgatacatggccat
gcctcagtgcctatagaatccctctcctttaggatgctgtgtccacaagacaaggttggc
agtataataggcaagggtggaaatattgttaaaactattcaaaaagatacgggctgtgaa
attaaagttcttgacactgttccaaaaacagatgatcgcatcataagtatatctggacct
gcgcatccgagtgatggaatatcccctgcacagaatgccattctgcatgtgcagcgtaaa
attatgttacctacctctgataagaaggaaggtcctgcaatatgtaggatgatcgtttca
gcaaaccaagttggttgtgttctcggcaaaggtggtagtatcatagctgaaatgaggaag
ctgtcaggagcatttatagtagtgttgagcaaagacaagattccaaggggtgtcccagag
catgatgaagttattcagataagcgggagctgtgaagctattcaagaagctctaatgcag
attactgctaggcttcgtaaccaccttttccgggtggacagaatgcctgcaatggggcct
aatatgcggccaccttttggtttgttagattctcagtttggtccatttgtgggaaaccat
gaatcgccatccctgtttcataaagattttatgggacggccattggatgggatctctgct
ccttggacagtgaagggcttgcgtgatctcagcgatccagtgtcaatatctgatatccct
ggagcagggcaaagagaagctggtggattttctggtcctggtcagccatctatgatgcca
aacttgactgcagaggttttagttccaagattaataatcccttctctctgtggtgaggat
ggaggttgtttggataggatccgtgagttttctgaagctaagataactgttgctgaacct
tttgtcgattcaatggacactgctgttttgatatctggtacaccagaccagatgcatgca
gcccgaagtcttgttcaagcattcgttatgagcgaatcatttgccccatga
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