Miscanthus floridulus: 136461638
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Entry
136461638 CDS
T10264
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
mflo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136461638
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
136461638
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mflo01009
]
136461638
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136461638
03036 Chromosome and associated proteins [BR:
mflo03036
]
136461638
Protein phosphatases and associated proteins [BR:
mflo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
136461638
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
136461638
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
136461638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B56
TOF-1-like_helical
Motif
Other DBs
NCBI-GeneID:
136461638
NCBI-ProteinID:
XP_066317027
LinkDB
All DBs
Position
6:10484478..10487603
Genome browser
AA seq
499 aa
AA seq
DB search
MWKQFIGKLSWKAMKSSSGGGAASSPPAKPPPPLSSPRENGASPRENGVTAKPNVSPPSP
AAGAGAEVRSREDAFVQKVNICCAVYDFSDRGKDSPEKERKRQMLMSLVDCIGAAEEPLT
ETMIAACVRMFAANLFRVFPPKVRSGTSASETEEDEPFFDPSWYHLQVVYEFLLRFVTSP
LVDAKVARKYVDSSFVSKLLDLFDSDDPRERDCLKTILHRIYGKFMGNRPFIRKAVSNIF
YRFVFETDHHNGIAELLEVFGSVISGFAKPLKEEHKLFLWKALIPLHKPKSVGVYLPQLT
YCITQFIEKEPKLSGTVIRGLLKYWPVTNSQKEMMFLGELEEVLELTDMAEFQKCMVPLF
RKIASCLNSSHFQVAERALFLWNNEHLFGMISQNRQVILPIIYPALERNTRWHWNQSVLN
VTMNVRKMFREMDERLLVACQNNFQEEEEKRAATEERRRLMWEQLERSVAHGYHQPVIAA
DASFPAPPSSGRLVAPTVT
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcaatttattggaaagctgtcgtggaaggcgatgaaatccagctctggcggc
ggggccgcgagctcgccgcctgcgaagccgccgccgcccctatcgtcgccgcgggagaat
ggggcctcgccgcgggagaatggggtcacggcgaagcccaacgtttcgcctccctctccc
gcggctggcgccggagccgaggtgaggtccagggaggacgcctttgtccagaaggttaac
atttgctgcgcggtgtacgacttctccgaccggggcaaggactcgccggagaaggagcgg
aagcggcagatgctcatgtccctggtcgactgcattggcgccgctgaggagcctctcacg
gagacaatgatagcagcgtgcgtgcgcatgttcgccgctaacctgttcagggtcttcccg
cccaaagtccggtctggcacctcggcttcggagaccgaggaggacgagcccttcttcgat
ccgtcctggtaccacctgcaagtcgtttatgagtttctccttaggtttgtgacttcgccg
ctcgtcgatgctaaggtggctaggaagtatgtggatagctctttcgtctccaagctgctt
gatctgtttgattcggatgacccgagagaaagggactgcttgaagacaatattgcatagg
atatatggcaagttcatgggaaaccgaccattcatccgtaaggctgtgagcaatatcttc
tataggtttgtgttcgagacagatcatcacaatgggatcgccgagctgttggaggtcttt
ggcagtgtaataagtgggtttgccaagccattgaaggaggaacataagctgttcttatgg
aaagcattgataccacttcataagccgaaatcagtgggagtgtatctgccacagctgaca
tattgcatcacacaatttattgagaaggaaccgaagctttctgggactgtgatcagaggc
ctgttaaagtattggccagttacaaatagtcagaaggaaatgatgtttttgggggagttg
gaggaggtgctggagttgactgacatggctgaatttcagaaatgcatggttcccttgttc
cggaagattgctagttgcctgaatagctctcattttcaggttgcagagagagccttattc
ctatggaacaacgagcacctattcggtatgatctcccaaaaccgtcaagtgatcctaccg
attatatacccagctctggagcggaacacccgctggcactggaaccaatctgtcctcaat
gtaacaatgaatgtgcggaaaatgttccgcgaaatggatgagaggcttcttgtagcctgc
cagaacaacttccaagaggaagaggagaagcgagctgcaactgaggagcggcggaggctc
atgtgggagcagctggagcggagcgttgctcatgggtatcaccaaccagtgatcgctgca
gacgcaagctttcctgcgcccccttcgtcgggtcgtcttgtagctcctaccgtgacatga
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