Miscanthus floridulus: 136461701
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Entry
136461701 CDS
T10264
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
mflo Miscanthus floridulus
Pathway
mflo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136461701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136461701
03036 Chromosome and associated proteins [BR:
mflo03036
]
136461701
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136461701
Coactivators
SAGA/TFTC/STAGA complex
136461701
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
136461701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
136461701
NCBI-ProteinID:
XP_066317098
LinkDB
All DBs
Position
6:complement(14174536..14183916)
Genome browser
AA seq
777 aa
AA seq
DB search
MSKAPDDQLQATEQEGSVHPSQQAGQQHVNTADQFSKTEITEGSKNEQPVQVEQQNSHLQ
QARPEIQLQQAETNSFQLAEKETGCFGQQSFAGTKVDVTQPSVVQQNVKQTVGQQASSDA
QDTRKGPSIPFNMLIPILQAHLDRDKDMQLQAVWAKLRRNEVHKDDFLRVIRNIVGDQML
KQAAHKVFVQMQAQAQRNSQANPSQQSLFSQVSSQPMPSSGSAQLHDQKLRPPGPPNQGH
KNQVSSSPQAFAPPSGTQAQNSVHYLAHDNPNQNPDAKGTNAVPNQPPRMNTAVPLQAKN
KQHQPTQLQQASQQIYGASNPGAQAYPRSITGSLRSPSPVPESQPSMHAPGMAPAKIVPP
PTHPMMQHNAVAWQMHQNKELKTNAPPPNANVKQNSESVGKARVAGTASSSAKGKQGTPN
STPNASGGAKSSKKSGGQKKSLEAAGSTQPSRFLINKKQKTSGAFQEQSIDQLNDVTAVS
GVNIREEEEQLLSAPMEESLASQEARRIAQEEEENLFLRKGPLLKKLAEIARKCDLKNIS
GDVEHCLSMCVEERLRRLISTLIRVSKQRIDTEKTGHRLVITSDVGRQILQMNQKAKEEW
DKKQAEEADKNKKQTEADGSGATELEKEKEESRPKNVKPNKEEDDKMRTNAANVAARQAV
GGSDMLSKWQLMAEQARQKREGLDVSAASQPGRGPGSRPLSKFGKGPSEHQEGSKRSHSV
AFGTGGMNRPGRTPYAGPQRMISVKDVICALEREPQMTKSRLIYRLHERLPVDSTVD
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagctccagatgatcagttgcaagcaacagagcaggaaggaagtgtccatcca
agtcaacaagcagggcaacaacatgtgaatacagcagatcagttctccaaaacagaaata
actgaaggttcaaaaaatgaacaacctgtccaagtagagcaacagaattcccacctacaa
caagcacgtccagaaattcaactacaacaggctgaaaccaatagcttccagttagctgaa
aaagaaacagggtgttttggtcaacagagttttgcaggcaccaaggtggatgttacccag
ccttcagtagttcagcagaatgtaaagcaaactgttggtcaacaagcatcatctgatgcc
caggatacaaggaaaggaccatcgataccatttaatatgttaattccgatcctacaggca
catcttgacagagacaaagatatgcagcttcaagctgtatgggcaaaacttaggcgtaat
gaagtccacaaagatgatttcttaagagttatcaggaatattgttggggatcaaatgctc
aagcaggcagctcataaagtttttgtacagatgcaagcacaggcgcaaagaaatagccag
gcaaatccaagtcagcagtctttattctctcaagtttcttcacagccgatgccttccagt
ggttcagcacagttacatgatcagaaacttcggccacctggaccacccaaccaaggtcac
aaaaaccaggtgtcatcttcacctcaggcttttgcaccaccatcaggcactcaagcgcag
aatagtgtacactatcttgctcatgataacccgaaccaaaaccctgacgcaaagggaaca
aatgctgtaccaaatcaaccacctagaatgaacacagcagttccattgcaagcaaagaac
aaacaacatcaaccaacacagttgcagcaggcctcacagcaaatatatggagcaagtaat
cccggtgcccaggcttaccctcggtcaatcactggttctcttagatcaccgagtcctgtt
ccagaatcacagccatccatgcatgctcctggaatggctcctgcaaaaatcgtccctcct
cctactcatccaatgatgcagcacaatgcagttgcatggcaaatgcatcaaaacaaggaa
ttgaaaactaatgctccccctccaaatgctaatgtgaagcaaaattctgaatctgttggc
aaagcacgcgtagctggcacagcaagttcttctgctaaaggaaagcagggaactcctaac
tctacacccaatgctagtggaggtgcaaagagtagcaagaaatcgggtgggcagaagaaa
tcattggaagcagcaggctctacgcaaccttcaaggtttttaattaacaaaaagcagaag
acatctggagccttccaggaacaaagcatcgatcaacttaatgatgtcacagccgttagt
ggtgttaatatcagggaagaggaagaacaattactgtctgcccctatggaagagagcctt
gcctcacaagaagcacgaagaattgcacaggaagaagaagaaaatcttttcctaaggaag
ggtccactcctgaagaaactagcagaaatcgctcggaaatgcgatctgaagaatattagt
ggtgatgtggaacactgtttatcaatgtgtgtggaggagcgtttgcgaagactcataagt
actctcatacgagtctcaaaacagagaatcgatactgaaaagaccgggcatcgactagtt
attacttcagatgttggtcgtcaaattttacagatgaaccagaaagctaaggaagaatgg
gataaaaaacaagcagaagaagctgacaagaacaagaaacaaactgaggctgatggcagt
ggtgctacagaattggaaaaagaaaaagaggaaagtcgcccaaagaacgtcaagcccaac
aaggaagaagatgataaaatgagaacgaatgctgcgaatgttgctgctcggcaagcagtt
ggtggaagtgatatgctctcaaagtggcagttgatggctgagcaagccaggcagaagcga
gaaggccttgatgtgtctgctgcttcacagccaggcagaggaccaggttccaggccatta
tccaaatttggaaaaggtcctagcgaacaccaggaaggttcaaagaggagccattcggtg
gcattcggaactggaggcatgaatagaccaggcaggacaccctatgctggtccacaacga
atgatctccgtgaaggatgtcatctgtgcccttgagagggagcctcagatgacaaaatca
cggctcatctaccggctgcacgagcggttgcctgtagattctaccgtagattag
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