Miscanthus floridulus: 136462306
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Entry
136462306 CDS
T10264
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 2-like
KO
K12195
charged multivesicular body protein 6
Organism
mflo Miscanthus floridulus
Pathway
mflo03250
Viral life cycle - HIV-1
mflo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
136462306
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136462306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136462306
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136462306
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
136462306
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
136462306
Exosomal proteins of other body fluids (saliva and urine)
136462306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
TINF2_N
Radial_spoke_3
DUF5069
Motif
Other DBs
NCBI-GeneID:
136462306
NCBI-ProteinID:
XP_066317509
LinkDB
All DBs
Position
7:538759..541840
Genome browser
AA seq
229 aa
AA seq
DB search
MGNIFVKKPKITDVDRAILTLKTQRRKLAQFQQQLEKVIEAEKEAARQLVQQKKRDRALI
ALKKKKAQEELLKQVDTWQMNVEQQLADIELASKQKAVFESLKAGNAALKSIQNEINIDD
VQKLMDDTAEAKAYQDEINAVLGEQLSAEDEEAVMAEFENLEAQLAVESLPDAPVSEVRP
EEKMKAPADTEAAPEDIDEVIELPDVPTKVPERPEAPEKTKVLEEPLPA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggggaacatcttcgtgaagaagcccaagatcactgatgtcgacagggccatcctcacc
ctcaagacgcagcgccgcaagctcgcccagttccagcagcagcttgagaaggtaatcgaa
gcagaaaaggaagctgcacggcagttggttcaacagaagaagagagacagagctttgatt
gctctgaagaagaagaaagctcaggaagagctgttgaaacaagttgacacatggcaaatg
aatgttgaacaacagctggcagatattgaactagcaagtaaacaaaaggctgtatttgaa
agcctgaaggctggaaacgctgcccttaagtctatacagaatgagataaacattgatgat
gtccaaaagctgatggatgacacagccgaggctaaggcttatcaagatgaaataaatgct
gttctgggcgagcagctctcagctgaggatgaagaagctgttatggccgagtttgaaaat
ttggaagctcagcttgccgttgagtctttgccagacgctcctgttagtgaagtacgacct
gaagagaaaatgaaagctccggctgacacagaagctgcacctgaggacatcgatgaggtt
attgagcttcctgatgtgcctacgaaagtgccagagaggcctgaagctccagaaaagacc
aaagttttggaggagccactacccgcatag
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