Miscanthus floridulus: 136462620
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Entry
136462620 CDS
T10264
Name
(RefSeq) WD repeat-containing protein RUP2-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
mflo04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136462620
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
136462620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136462620
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136462620
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136462620
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
136462620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
NESP55
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
136462620
NCBI-ProteinID:
XP_066317789
LinkDB
All DBs
Position
7:13878599..13880665
Genome browser
AA seq
452 aa
AA seq
DB search
MSNPSSPASSSSSAAAQEHRLQEEETQNLHHRHHQEVAAGIVIPFPPSSSEADQAHDDKD
AELSPPRCEWEFRLAATVPTTALPGASDAIGSVDFDPTGCLLATGGIARKIRMYDVASML
LLDSAGSGGARAAGPAACICAPAKLSSVRWRPGGAASSSVVGCGDYDGVVTEYDVERGVA
SWERDEHAGRRVWSLDYAPGAAMAASGSDDRTAHVWDPRAPSGGLATARAGGAVLCVEFD
PSGAPHLAVGSADSRAVVYDVRALGRGAVARMDGHARAVTYVRWAGPGPARRVVTSAADG
THRLWEWGGASAAEAGVEVAGAREVRSYSGHASARSFVGMGVWRGAGLVASGSESNHVFV
YDLRWAKPIWVHPFFASHGHGGAHGPVTTGPEQVDTGGGFVSAVAWRQGSHTDDDLNGGA
LVAGGSDGVLKVFTCRRRREAAGDDVAHGRLL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacccctcttctccggcctcttcttccagcagcgccgccgcacaagagcaccgc
ctgcaggaagaggaaacccaaaacctgcaccaccgccaccaccaagaggtagccgccggc
attgttattccgtttcctcccagtagcagtgaagctgatcaagcccacgacgacaaggac
gccgagctgtcgccgccgcgctgcgaatgggagttccggctggcggccaccgtgccgacc
accgccctgccgggtgcgtccgacgccatcggcagcgtcgacttcgaccccaccggctgc
ctcctcgccaccggcggcatcgcccggaagatccggatgtacgacgtggcctccatgctg
ctgctggatagcgccggcagcggcggcgcccgagctgctggccccgcggcgtgcatctgc
gcgccggcgaagctgagcagcgtgcggtggcgcccgggcggtgccgcgtcgtcgtccgtg
gtggggtgcggcgactacgacggcgtggtgacggagtacgacgtggagcgcggcgtggcg
tcgtgggagcgcgacgagcacgcgggccgccgcgtgtggtccctggactacgccccgggc
gcggccatggcggcgtccgggtcggacgaccgcacggcgcacgtgtgggacccgcgcgcg
ccctcaggcggcctggccacggcgcgcgccggcggcgccgtgctgtgcgtggagttcgac
ccctcgggggcgccccacctggccgtcggctccgcggacagccgcgccgtcgtgtacgac
gtccgcgcgctgggccgcggcgccgtcgcgcggatggacggccacgcccgcgcggtgacg
tacgtgcggtgggcgggtccggggccggcgcggcgggtggtgacgtcggctgccgacggg
acccaccggctgtgggagtggggcggcgcgtcggcggcggaggcgggggtggaggtggct
ggggcgcgggaggtgcggtcgtacagcggccacgcgagcgcgcggagcttcgtggggatg
ggcgtgtggcgcggggcggggctggtggccagcggctccgagtccaaccacgtcttcgtc
tacgacctcaggtgggccaagcccatctgggtgcaccccttcttcgcgtctcacggacac
ggaggggcccacggcccagtcaccaccggccccgaacaagtggatactggtggtgggttc
gtcagcgcggtggcgtggcggcagggcagccacaccgacgacgatctcaacggcggtgcg
ctggtcgccggcggctccgacggcgtgctcaaggtgttcacgtgccgacggcggagggag
gcggcgggggatgatgtcgcccatgggcgcctcctctaa
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