Miscanthus floridulus: 136462945
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Entry
136462945 CDS
T10264
Name
(RefSeq) SWI/SNF complex subunit SWI3B-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mflo Miscanthus floridulus
Pathway
mflo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136462945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136462945
03036 Chromosome and associated proteins [BR:
mflo03036
]
136462945
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
136462945
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
136462945
PBAF complex
136462945
GBAF(ncBAF) complex
136462945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
136462945
NCBI-ProteinID:
XP_066318088
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All DBs
Position
7:29177163..29181051
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AA seq
496 aa
AA seq
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MATTATTTATVTAAAATANSVPTPTPPHPRPAAPPALRAPSTLGPVKSEATPTPSSSTAT
AAAAAGAEDPSYIITVPSYSAWFSFDSIHDTERRLLPEFFEGEAAAASGCRGPHAYKYYR
DSLIRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEWGLINYGALPSGSKQAKEKR
EEVAQQSLLPSGATVPRKLCTGCRTVCGLAYYACDKADISLCTRCYVNNNYRPGLSPANF
KRVEITEDAKSDWTDKETLHLLEAVLHYGEDWKKVSEHVGSRLEKDCIARFIRLPFGEQF
MGPKEDRMGFENNDDNTDEPGADVSKRLRLTPLADASNPIMAQVAFLSAIVGSDVASAAA
QAAISAQSRVDLNDSEIETSINSTKEEESSHTNGLSVNDLLKEAAANARAQLEKERNSIE
QSLSNIVDVQMKEIQGKICRFEQKEMLMEKERQQLNCLRDLLFTDQLAVMQHQQRTPAAV
TECRGDEKPKPVANMS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggccacaacggcgacaacgacggcgacggtgacggcggcggcggccacagccaactcc
gtacctacaccaacaccgccgcatccacgccccgccgctccacctgctctccgggcgcct
tccaccctgggtcccgtcaagtcagaggctactcccaccccctcgtcctctaccgccacc
gccgccgccgccgccggagcggaggatccatcctacatcatcactgttcctagttattca
gcatggttctcgttcgactccatccacgacacggagcgccgcctccttccggagttcttc
gagggggaggccgcggcggcgtccgggtgccggggcccgcacgcgtacaagtactaccgc
gactccctgatacggaggttccgagcgcggccgggtcgacggctcacactcacggaggcc
aggagggggcttgttggtgacgtcggctcagtccgccgcgtcttcgatttccttgaggaa
tgggggctcatcaactacggtgctttgccatcggggtcaaagcaagcgaaagagaagagg
gaagaggtcgcgcaacagtccttgttgccttctggggcaactgtacccaggaagctctgt
accgggtgccgcaccgtgtgtgggcttgcttactacgcctgcgacaaggcagatataagt
ctttgtactagatgttatgtaaataataactaccggccgggtctgtctcctgctaacttc
aagagagttgaaattactgaagatgcaaaatcagattggacagacaaagaaactcttcac
ttgcttgaggctgtcttgcattatggcgaagactggaaaaaggtgtctgaacatgttggt
agtcggttagaaaaagactgtattgcaagatttatacggttacctttcggagaacagttc
atgggacccaaggaggatagaatggggtttgagaacaatgatgacaatactgatgagcct
ggagcagatgtctcaaaacgactacgtctgactccactagcagatgcaagcaatccgatt
atggctcaggttgcatttttatcagccattgtgggttccgatgttgcttcagctgcagcg
caagcagctatttctgcacaatcccgtgttgacctaaatgacagcgagattgaaacttca
ataaatagcaccaaggaagaagaatcatctcacacaaatgggctctcagttaacgattta
ctgaaagaggcggctgctaatgcacgggcacaacttgagaaggaacggaacagcatagag
caatctttatcaaacatagtagatgtccagatgaaggaaatccaaggtaaaatatgccgg
tttgaacagaaggagatgctgatggagaaagagcgacagcagctgaattgtctaagggat
ctacttttcacagatcaattggcagtcatgcaacatcaacaaaggactccagctgcagtc
acagagtgcagaggtgatgagaagccaaagcccgtggctaacatgagttga
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