Miscanthus floridulus: 136463355
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Entry
136463355 CDS
T10264
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit C-like isoform X1
KO
K07466
replication factor A1
Organism
mflo Miscanthus floridulus
Pathway
mflo03030
DNA replication
mflo03420
Nucleotide excision repair
mflo03430
Mismatch repair
mflo03440
Homologous recombination
mflo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136463355
03420 Nucleotide excision repair
136463355
03430 Mismatch repair
136463355
03440 Homologous recombination
136463355
03460 Fanconi anemia pathway
136463355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136463355
03032 DNA replication proteins [BR:
mflo03032
]
136463355
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136463355
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
136463355
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
136463355
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
136463355
MMR (mismatch excision repair)
136463355
DSBR (double strand breaks repair)
HR (homologous recombination)
136463355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
zf-CCHC_2
DUF223
CDC24_OB3
OB_POT1A
RADX
zf-like
Motif
Other DBs
NCBI-GeneID:
136463355
NCBI-ProteinID:
XP_066318452
LinkDB
All DBs
Position
7:67522232..67525752
Genome browser
AA seq
835 aa
AA seq
DB search
MEAAAQLTPGAVQAIANGAVPAALQPVLQVLEVCRIATTKSGNSSANPNPIPSERERYRL
ILSDGINAHQAILATAFNPFVRDGTLRAGTIVHLNEFICDTIQDKRIIIIVKIEILQTAC
ALIGNPKNYMAQSLEKVQDPNLSAIAAQNSGAPGMLESSVALRADQASNNLSYGGPYNDV
QGMVGFSIGRTVEPDHSNVFTGGSYGTLSAQNTVNANMVEPRFQQPSLISHQNQGFAVTG
TGEALTPPGNAHRRHEHSYQQLPSGYINRASVASEPTSHVVPISSLKVYQTRWTIKARVT
AKTVVKHWNNAKGTGKLFSFDLLDGEGGQIRAVCFKEAVDRFYDLIEVDKVYLISRGAVK
PSQKRFNPLNNDLEITLDALLSSVEICSSDDFNIPKVQYSFRQISEIENMDNHTVVDLLG
VVTSVGPSVMMTRKGGTQTQKRTLQLRDMSGRSVGVTFWGNFCDVEGQQLQLQCDSSFNP
ILALIGARISDFSCRSVSTIGSTQLKINPDFPDAERLRQWYVTEGMATACLSLSRQQFNS
VQADVRKTIAQIKDETLGRGKTDWITVKAAISHVQTENFCYPACPFVFNEKPCNKKVIES
RDGMWFCERCDKSSGSCEYRYMVKFQIQDHTSTINATAFQEAGEKIFGRTAQELRTIRNV
DHDEALFTEIIEGARWHLNLFKLKVREESYNDEQLIGCTIVSAEKLDPSKESRILFETID
SLMQSRSGPSPGDQGNIASKAGFSNSPGGRSAINMCGANQFGQQGSIDGRVSTTPAGGGF
TGNNYGSAAGNARSDVCFKCNQPGHYFRDCPRHVTAPQHQAHDNGAAFRGFTGGN
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcggcgcagctgacgccgggcgctgtccaggcgatcgcgaacggggcggtg
cccgcagcgctccagccggttctccaggtgctggaggtgtgccgtatcgccaccaccaag
agcggtaactccagcgccaaccccaaccccatcccctcggagcgggagcgctaccgcttg
atactctccgacggcatcaacgcgcaccaggccatcctcgccaccgccttcaacccattc
gtcagggacggcaccctacgcgcgggcacaatcgtccacctcaacgagttcatatgcgac
accatccaagataaaaggatcataattattgtgaaaattgaaattctgcaaactgcatgt
gccctaatcgggaaccccaaaaactacatggcacaaagtctagagaaggtacaagatccc
aacttatcggccattgctgctcaaaattctggtgctccaggcatgctggagtcttctgtt
gctctaagagcagatcaagcttctaataatctgtcatatggtggaccctataatgatgtt
caaggcatggtaggtttttccattggccggacagtagaacctgatcatagcaatgtgttt
actggaggctcttatggtacattgtcagcacaaaacacagtaaatgcaaatatggtggag
ccaagatttcagcagccttctctgatctctcatcaaaaccaagggtttgcagttactggc
acaggtgaggccttgacccctccaggcaatgctcaccggcgccatgagcattcatatcag
cagctaccttcagggtatatcaatagagcttcagttgctagtgaaccgacatcccatgtt
gtccccatttcttcattgaaagtttaccagactagatggacaatcaaggccagggtgact
gctaagactgttgtcaagcattggaacaatgccaaaggtacagggaaacttttctcattt
gatctccttgatggagaaggtggacaaattcgtgcagtatgcttcaaagaagcggttgat
cggttttatgatctaattgaggttgataaggtgtacttgatatctagaggagcagtgaaa
ccttcacagaagcggtttaatcctttgaataatgatcttgaaataactctggacgcctta
ctgtcatctgtagagatttgttctagtgatgatttcaatattcctaaggtgcagtacagt
tttcggcagatcagtgaaatagagaacatggataatcatactgtggtagatttacttggt
gttgttacatcagttggtccttctgttatgatgacaaggaagggtggcacccaaacccag
aaaagaacccttcaattgagggacatgtctggtcggagtgtgggagtgaccttttgggga
aacttctgtgatgttgaagggcagcagttacagctgcagtgtgattctagtttcaatcct
atacttgctttgataggtgcccgtatcagtgatttcagctgtagatcggtgagtacaata
gggtcaacacagttgaaaataaacccagactttcctgatgctgaaaggctgagacagtgg
tatgtaactgaaggaatggccactgcttgtctctctctgtctcggcaacagtttaattca
gtccaggctgatgtccgcaaaacaattgcacaaatcaaggatgaaaccttgggacgtggt
aagacagactggatcactgttaaggctgcgatctcacatgtgcagactgaaaatttttgt
tatccagcatgcccctttgtttttaatgagaagccatgcaacaaaaaggtcatagagagt
cgtgatgggatgtggttttgtgaaagatgtgataagagctctggaagctgtgagtacagg
tacatggttaaatttcaaatccaagatcacaccagcactatcaacgctaccgcattccag
gaggctggtgagaagatatttggccgcactgcacaagaacttcgcacaataagaaatgtt
gaccatgacgaagcactattcacagagatcatagaaggagcccgttggcatctaaatcta
ttcaagttgaaagttagggaggaaagctacaacgatgaacagcttattggatgtaccata
gttagtgctgaaaagttggatccatccaaagagagtaggatcctttttgaaaccattgac
agccttatgcagagcagatcaggcccaagcccaggagatcagggcaacattgcctctaaa
gctggtttcagcaattcaccaggtggtcgcagtgccatcaatatgtgtggcgcaaatcag
tttgggcagcaaggaagcatagatgggagggtgtctactacaccagcgggtggaggcttc
acaggcaacaactatggctctgctgctggcaatgccagatcagatgtgtgtttcaagtgt
aatcagcctgggcactatttcagagactgcccgaggcatgttactgccccccagcaccag
gcacatgacaatggtgctgcatttagaggctttacaggtggcaactaa
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