Miscanthus floridulus: 136463395
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Entry
136463395 CDS
T10264
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136463395
09123 Folding, sorting and degradation
03018 RNA degradation
136463395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136463395
03041 Spliceosome [BR:
mflo03041
]
136463395
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136463395
mRNA degradation factors
5'-3' decay
Lsm complex
136463395
Spliceosome [BR:
mflo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
136463395
Complex C
U2 snRNP components
136463395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
DUF1256
DUF150_C
Motif
Other DBs
NCBI-GeneID:
136463395
NCBI-ProteinID:
XP_066318491
LinkDB
All DBs
Position
7:69646584..69651377
Genome browser
AA seq
93 aa
AA seq
DB search
MLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVLLPQDGVDIDILHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcttctcctacttcaaggagctcgtggggaaggaggtgacagtggagctcaag
aatgacctggcaatacgtgggacgctccactctgttgaccagtacctcaacatcaagctc
gagaacacccgtgttgtcgatcaggacaagtatccccacatgctatcagtgaggaactgc
ttcatcaggggctcggtggtgcggtacgtgctgctcccacaggacggtgtggatatcgac
atcctccacgacgccaccaggagggaggcacgcggaggctga
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