KEGG   Miscanthus floridulus: 136463395
Entry
136463395         CDS       T10264                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
mflo  Miscanthus floridulus
Pathway
mflo03018  RNA degradation
mflo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    136463395
  09123 Folding, sorting and degradation
   03018 RNA degradation
    136463395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mflo03019]
    136463395
   03041 Spliceosome [BR:mflo03041]
    136463395
Messenger RNA biogenesis [BR:mflo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     136463395
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     136463395
Spliceosome [BR:mflo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    136463395
 Complex C
  U2 snRNP components
    136463395
SSDB
Motif
Pfam: LSM SM-ATX LSM14 DUF1256 DUF150_C
Other DBs
NCBI-GeneID: 136463395
NCBI-ProteinID: XP_066318491
LinkDB
Position
7:69646584..69651377
AA seq 93 aa
MLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVLLPQDGVDIDILHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgttcttctcctacttcaaggagctcgtggggaaggaggtgacagtggagctcaag
aatgacctggcaatacgtgggacgctccactctgttgaccagtacctcaacatcaagctc
gagaacacccgtgttgtcgatcaggacaagtatccccacatgctatcagtgaggaactgc
ttcatcaggggctcggtggtgcggtacgtgctgctcccacaggacggtgtggatatcgac
atcctccacgacgccaccaggagggaggcacgcggaggctga

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