Miscanthus floridulus: 136463534
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Entry
136463534 CDS
T10264
Name
(RefSeq) N-glycosylase/DNA lyase OGG1-like isoform X1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
136463534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136463534
Enzymes [BR:
mflo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
136463534
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
136463534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
136463534
NCBI-ProteinID:
XP_066318616
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Position
7:complement(78778972..78781579)
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AA seq
417 aa
AA seq
DB search
MRLPLLPRSTPLAAAVAAMPPRRRRVVRAPSLTPSPPQLSSTPPPVPSIEAPKPETPDHH
DPTPSARRRLPLAAGAVEAQEEWHPLPLSTADLSLPLTLPTGQTFLWRRTSLSPLRFTGA
VGPHLVSLSHLPDSDDGRLAFLLHNDGGYPASSVPSARAALSDYLNAAVSLADLWRQFAA
ADERFAEVSARLGGGGARVLRQDPVECVFQFLCSSNNNIARIEKMVWTLAGYGERLGEVG
GFVFHRFPTIERLARVSEQELREAGFGYRAKYIVGTAKELQAKPGGGEKWLASLRKKELS
DVIEALCTLPGVGPKVAACIALFSLDQNHAIPVDTHVWKVATQYLLPELAGKSLTPKLSV
IVADAFVTRFGSYAGWAQNVLFIGQLPAQKLVVAQVTSDNGTTKPTKRKRGVQPKPC
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcccgcttcttccacggtctactcccctcgccgccgctgtcgccgccatgcct
cctcgccgccgccgcgttgtcagagcgccgtcgctcacgccgtctcctccacaactctct
tctaccccgccgccggtcccgtccatagaggcccccaaacctgaaacccccgaccaccac
gatcccactccctccgcccgtcgccgcctccccctcgctgccggggccgtcgaggcgcag
gaagagtggcatccactcccgctctccacggccgacctttccctcccgctcaccctcccc
accggccagaccttcctctggcgccgcacttccctctctccgctccgcttcaccggtgcc
gtggggccccacctcgtctccctctcccacctgcccgactccgacgatggccgcctcgca
ttcctcctccacaacgacggcggttaccccgcctcctcggtgccctctgcccgcgccgcg
ctcagcgactatctcaacgcggccgtctccctcgccgacctctggcggcagttcgccgcc
gcagacgagcgcttcgctgaggtctccgcgcgtctcggtggcggcggcgcgcgggtgctt
aggcaggaccccgtcgagtgcgtcttccagttcctctgctcctcgaacaacaacattgcc
cggatcgagaagatggtgtggacgctggcaggctacggggagcggctcggcgaggttggt
gggttcgtgttccaccggttccccacgattgagcggctcgcgcgcgtgtcggagcaggaa
cttcgtgaggccgggtttgggtacagggcaaagtacattgttggcactgctaaagaattg
caggccaaacctggtggaggtgaaaaatggcttgcctcactgcgtaagaaggagctttca
gatgtgattgaagctctttgcactctgccaggtgttggtccaaaggtcgctgcctgcatt
gctctgttctcccttgatcaaaatcatgctattcctgttgacacacatgtttggaaggtt
gctacacaatatctattaccagagctagctggcaagagcttgactccaaaacttagtgtt
attgttgccgatgcctttgttactagatttggaagctacgctggttgggcacaaaatgtt
ctcttcattggccagctacctgctcaaaaacttgtggtggctcaagttaccagtgacaat
ggtaccacaaaaccgaccaaaaggaagcgcggggtgcaaccgaaaccatgttga
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