Miscanthus floridulus: 136463874
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Entry
136463874 CDS
T10264
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136463874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136463874
03016 Transfer RNA biogenesis [BR:
mflo03016
]
136463874
Enzymes [BR:
mflo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
136463874
Messenger RNA biogenesis [BR:
mflo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
136463874
Transfer RNA biogenesis [BR:
mflo03016
]
Prokaryotic type
tRNA degradation factors
136463874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
S1_RRP5
KH_1
CvfB_2nd
Urease_gamma
Motif
Other DBs
NCBI-GeneID:
136463874
NCBI-ProteinID:
XP_066318943
LinkDB
All DBs
Position
7:95659422..95668285
Genome browser
AA seq
979 aa
AA seq
DB search
MSMAVASSLRSLARRRPRLRLPAAPLVVPGGRAALLSGAAEEAAPLEAAAAAAPAPGRKV
LESFREEFEIGGRSIAFETGKMARFANGSVVISMEDTHVLSTVAAAKSSEPVRDFLPLTV
DYQEKQYAQGVIPTTYMRREGAPKERELLCGRIIDRPIRPLFPPGFYHEVQIMVNVLSSD
GKQDPDVMAANASSAALMLSDIPWNGPIGVIRVGRINGTFVLNPTVDELGLSDLNLVYAC
SRDKTLMIDVQAREITERDLQAGMKLAHSEAIKCIDPQIRLAKRTGKEKKEYKISLISDT
SYEKIRTFSEAPIEEVFTDSSYGKFQRGEALEKITQSVKAKLEEENDEDSLKFLHKAVDT
VRKQVIRKRIIEEGLRVDGRQLDEVRPLHCESNTYPVLHGSALFSRGDTQVLCTVTLGAP
GDAQRLDSIVGPPTKRFMLHYSFPPFSINEVAKRGGLNRREVGHGTLAEKALLAVLPAES
DFPYTVRVNSEVMASDGSTSMASVCGGSMALMDAGIPVREHVAGVSVGLVSQVDPATGEI
SNYRILTDILGLEDHLGDMDFKIAGTRKGITAIQLDIKPAGIPLDIICESLEPARKARNQ
ILDRMDQEISTARAINDGSSPRLATLSFSSDSLRKLLFHRKKIEQETGARVSVSDGTVTI
VAKTQEIMDKAIEKIEFLVGREIEVGRTYKGIVSSIKEFGAFVEFNGGQQGLLHISELSH
EPVAKVSDVVTVGQSLSLRCIGQDVRGNIKLSLKATLPQPRSKKDLKSKDPLPSQVSGWA
AVENVSSVDADAEPSSTEHENGTTEEAPAFSAPSVIIRSAADCDAQDYANGPKKRAKAAK
SSPRPYKPASECHEVRKATAKKATGATTKKTKKVKIEESGSNGLQTSGSDVPEQTADNTL
DLNQSPTNFQSGAMKLGDVVTAKVYQIRAFGLVLELSDGARGMHKFEANGQKEFEVGQEL
LVKCSSFNAKGIPVFSLLD
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggcggtggcctcctccctccgctccctggcgcgccgccgaccccgcctacgc
ttgcccgctgcgccgctcgtcgtccccggcggccgggcggcattactctccggcgcggcc
gaggaggcggcgccgctggaagcggcggcggcggcggcgcctgccccgggtcggaaggtg
ctggagagcttccgggaggagttcgagatcggggggcgctccatcgccttcgagacggga
aagatggcgcgcttcgccaacggctccgtggtgatctccatggaagacacccacgtcctc
tcaaccgtcgccgccgccaagtcctctgagcccgttcgggacttcctcccactaactgtt
gactatcaagagaaacaatatgctcaaggtgttatccccacaacatatatgcgcagggaa
ggtgctcctaaggaaagagaactcctgtgtgggcgtataattgatcgaccaataagacca
ttgtttcctcctggcttttaccatgaagttcagatcatggtaaatgttctttcatcagat
ggaaagcaagatccagatgtaatggctgcaaatgcctcttcagctgcactaatgctatct
gacattccttggaatgggccgattggagtaatacgtgtagggagaattaatgggactttc
gtcttaaatcctacagtggatgagctaggtttgagtgatctcaatcttgtttatgcatgt
tcacgggataaaactttaatgatagatgtacaagctcgtgaaataactgagagggatctt
caggcaggaatgaagcttgcacactctgaggcaattaaatgtatcgaccctcaaataagg
ttggctaagcgaactggcaaagagaagaaagaatacaagatatcactgatttcagataca
tcctatgagaaaattagaacattctcagaagcacccattgaggaagtcttcactgattca
tcatatggcaagtttcaacggggggaagctttagaaaagatcacacaatctgtgaaggca
aagcttgaggaagaaaatgatgaggacagcttgaagtttcttcataaggcagttgacaca
gtgagaaaacaggttatacgtaaaagaataattgaagagggacttagagtagatggtaga
caacttgatgaagtgagaccattgcattgtgaatccaacacatatccagtattacatggg
tctgccctgttttctcgtggagacacacaggttctttgtacagttacccttggtgctcct
ggcgatgctcagcggctggattcaattgttggccctccaacaaaacgtttcatgcttcac
tatagctttcccccattttcaataaatgaagttgccaagcgtggaggcctgaatcgacga
gaagttggacatggcactcttgcggagaaagcattgcttgctgtgcttcctgcagaaagt
gattttccatacaccgttcgggtaaattcagaagtcatggcatcggatggttcaacatca
atggcatcagtatgtggaggaagtatggccttaatggatgctgggatacctgtaagagaa
catgttgctggagtttcagtgggtcttgtaagtcaagtggacccagctactggagaaatt
tctaattatcgcatattaacggatattctgggccttgaggatcacttgggtgacatggac
ttcaaaattgcaggaacaaggaaaggtattactgctattcagctggatataaaacctgct
ggaataccattggacataatatgtgaaagtttagagcctgcacgtaaggctcgaaatcaa
atccttgaccgcatggaccaggaaataagtactgcacgtgctattaacgatggaagttcc
cctcgattagctacactgagcttcagcagcgattctcttaggaaattgcttttccacagg
aaaaaaattgagcaagaaacaggtgcacgagtatcagtcagtgatggtacggtcactatt
gttgctaaaactcaagaaattatggataaagctattgagaagattgagttcctcgtggga
cgtgaaattgaagttggtcgtacatacaaaggaattgtttcctcaattaaggagtttggc
gcttttgtggagttcaatggtggacagcaaggcttacttcacatttcagagttgtcacat
gaaccggtagcgaaagtctcagatgttgtaactgttggccaatctctctctctgagatgt
attggacaggatgtgcggggtaacattaaactttcacttaaagcaaccttaccccaacca
cgtagcaagaaggatttgaaaagtaaggatcctttgccaagtcaagttagcggttgggct
gctgtagagaacgtgagtagtgtggatgctgatgctgagccatccagtaccgaacatgaa
aatggcacaactgaggaggcacctgcgttttcggctccttcagttataattcgaagtgct
gctgactgtgatgctcaagattatgcaaatggtcctaagaagcgggcaaaggctgcaaag
tcatctcctagaccatataaaccagctagcgaatgtcatgaggttaggaaagctactgct
aagaaagccacaggtgctactaccaagaaaactaagaaagtaaagattgaggaatctgga
agtaatggactgcaaaccagtggttcagatgttccagaacagactgctgacaacactttg
gacctgaatcagagtcccacgaacttccaatctggggcaatgaagttgggtgatgtagtt
acagcaaaggtctaccagattcgagcctttggactagtacttgagttgagtgatggtgcg
cgtggaatgcataaatttgaggcaaatggccaaaaggaatttgaagttggacaggaacta
ctagtgaaatgttctagtttcaacgctaaggggattcctgtattctcattgctggactag
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