KEGG   Miscanthus floridulus: 136464345
Entry
136464345         CDS       T10264                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
mflo  Miscanthus floridulus
Pathway
mflo03020  RNA polymerase
mflo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    136464345
  09124 Replication and repair
   03420 Nucleotide excision repair
    136464345
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mflo03021]
    136464345
   03400 DNA repair and recombination proteins [BR:mflo03400]
    136464345
Transcription machinery [BR:mflo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     136464345
DNA repair and recombination proteins [BR:mflo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      136464345
SSDB
Motif
Pfam: RNA_pol_Rpb4 DUF4502 LmjF365940-deam DUF2240 RAP1
Other DBs
NCBI-GeneID: 136464345
NCBI-ProteinID: XP_066319399
LinkDB
Position
7:complement(114720404..114724816)
AA seq 220 aa
MDRVPNGRHKVSANRPVVVLSDTDSDSDTEGFVEELTPVHSKSNGKASSASLKTGGKASS
FSKGEASNGKAYSSGKGGKGSSSHAVPTKSDAELKLELDIPPNSRMLMNCEAAELLQEIH
EHMAILSEDPKIKIPESFDKAFQYAKDGNHFTTASSVKQALEPLKKCGVSDGEICMIANI
GPETAEEVYALVPSLKANRSATEGSVTVVLAALANIKAAK
NT seq 663 nt   +upstreamnt  +downstreamnt
atggatcgagtaccgaatggaaggcataaggtttctgccaatagacctgtagttgtgctt
tcagatactgattctgactctgacactgaaggttttgtagaagagctgactcctgttcac
tcgaagtcaaacgggaaggcttcatctgcgagcctaaaaactggtggaaaggcttcatcc
ttttctaaaggagaggcaagcaatggaaaagcatatagtagtggcaaaggtggaaagggt
tcttcatcacatgcggtgcctaccaagtctgatgcagaactaaagctagagcttgatatc
cctccgaattctagaatgctaatgaattgtgaagcagctgaactattgcaagaaattcac
gagcacatggctatactatcagaggaccccaagatcaaaattcctgagtcttttgacaaa
gcttttcagtatgcaaaagatggaaaccatttcaccactgcaagctctgtgaaacaagcc
cttgaacctcttaaaaaatgtggggttagtgatggcgagatatgcatgatagcaaacatt
gggcctgagaccgctgaagaggtttatgcactagtaccatctctcaaggctaataggtca
gctaccgaaggttcagtcactgtggttcttgctgccctcgcaaacataaaagctgctaag
tga

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