Miscanthus floridulus: 136464565
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Entry
136464565 CDS
T10264
Name
(RefSeq) DNA repair and recombination protein RAD54-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136464565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136464565
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
136464565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
136464565
NCBI-ProteinID:
XP_066319606
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All DBs
Position
7:complement(122683882..122693586)
Genome browser
AA seq
970 aa
AA seq
DB search
MPSRSQYNRRGSDGDEDEIVAVSSDSEESESEANRGAEADDDDEYVGESSDAGGGDEAEE
AGSSDCGEGGDVDGDDHDGHGKRPLRGLRRGAAAPDKERKSQNVDALVRGNLVVRRQPLI
PRILSVSDAAAIARKPFKPPCQNGYSDNNEQLARRLSARKRFVPWGSTQTFAVIHHLPQP
PVVASDSSSEKEEPLPPGIEPLILWQRDECEKENCNSASIEVDHLLVRYLRPHQREGVQF
MFDCVSGSLSADGISGCILADDMGLGKTLQSITLLYTLLCQGFDDKPMVKRAVIVTPTSL
VSNWESEIIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQVLIISYETFRMHSSKF
ERPGSCDLLICDEAHRLKNDQTLTNKALAALPCTRRILLSGTPMQNDLEEFFSMVNFTNP
GVLGDASYFRRYYEAPIICGREPTASAEEKKLVSDRSAELSAKVNQFILRRTNALLSNHL
PPKIVEVVCCKLTPLQITLYNHFIHSKNVKCLISEEAKQSKILAYITALKKLCNHPKLIY
DTIKSNNSGGSGFDDCLRFFPPELFSGRSGSWTGGGGMWVELSGKMHVLARLLGHLRQKT
DDRIVLVSNYTQTLDLFVQLCRERRYPYVRLDGATSINKRQKLVNQFNDLSRDEFVFLLS
SKAGGCGLNLVGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVY
QRQMSKEGLQKVIQQEQADNKMQGSSLSTEDLRDLFTFHEHVRSEIHENLKCSRCDKDGN
SALDGTGFAATDHKASIPGVQDYADIGRFGEISGCLQKMNSAHHQIGRPTEEDLGSWGHH
FDPSTVPDTVLQCSAGEEVSFVFTNQVDGKLVPVESMVRSAAHQQNGIVDTGEKGVQKTD
SPSKPGRQSLNGKNLKLMGFNLKNSSLKCSTKSRTSPNCLQGLKKTSPSLDQPQSKKLHV
ASDISDDDFV
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgaggagccagtacaaccgccgcggcagcgatggggacgaggacgagatcgtt
gcagtctcatccgactcggaggagtcagagtcggaggcgaaccgcggggccgaggcagac
gacgacgacgaatacgtgggggaaagcagtgacgcgggcggcggggacgaagcggaggaa
gcaggcagcagcgattgcggcgagggcggtgacgtggacggggacgaccacgatggccac
ggcaagcggccacttcggggcctgcgtcgcggcgcggcggctcccgataaggagaggaaa
tcgcagaacgtggatgctcttgtcaggggtaacctggttgtaaggaggcagccactcatt
ccacgtattctttcagtttctgatgcagcagcaatagctcgtaagccattcaaacctcca
tgccaaaatggatatagtgacaataatgagcagcttgctcggcgcctttcagctcgtaaa
agatttgtcccgtggggttcaacacagacatttgcagttatacaccatcttccacagccg
cctgttgttgctagcgatagttcgtcagaaaaggaggaacctcttccacctggtattgag
ccattgattttgtggcagcgcgatgaatgtgagaaggaaaattgcaattctgcttctatc
gaagtcgaccacttgcttgtgcgttacctccgaccccatcaaagggaaggagttcagttt
atgtttgattgtgtctctgggtcattgagtgctgatggtatttctggttgcattttagct
gatgatatgggattggggaagactttacagtcaataactttactatatacccttctttgt
caaggcttcgatgataagccaatggttaaaagggctgtcattgtaacccccacaagctta
gttagcaactgggaatctgagataattaagtggttgaaaggcagagtgcagctgctggcc
ctctgtgaaagcacacgtgctgatgttctttccggaatagaaagtttcttaaaacccttg
agccgtcttcaggtacttatcatatcttatgagactttccgcatgcattcttcaaaattt
gaaagaccgggcagctgtgaccttctcatatgtgatgaggcccacaggctgaaaaatgat
cagacactgacaaataaggctttggctgcccttccttgtacacggcgcatcctcttgtcc
ggtaccccaatgcagaatgatttggaagagttcttctcaatggtgaatttcacaaatcca
ggggttctgggggacgcttcatattttcgtcgttattatgaagcaccaatcatctgtggg
agagaacccactgcaagtgcagaagaaaagaaattggtatctgatagatctgcagagctt
agtgcaaaagtaaatcagtttatcttgagacgaacaaatgccctattatccaatcacttg
cctccaaagattgttgaagtcgtgtgctgcaagttgactcctctgcagataacactgtac
aaccacttcatacattccaaaaacgttaaatgcttgatatctgaagaagcaaagcaatcc
aaaattctagcatatattaccgctcttaagaaattatgcaatcatccaaagctgatctac
gacaccataaaaagtaacaattcaggtggctctggttttgatgactgtctgcgctttttt
ccgccagaacttttttctggaaggtctggatcatggactggcggaggaggaatgtgggta
gagctatctgggaaaatgcatgtattggcaagattactggggcacctccgtcagaaaact
gatgatcgtattgttcttgtatcaaattatactcagacattagatctgtttgttcaatta
tgccgggaaagaagatacccatatgttagacttgatggagcaacatccatcaataaaagg
cagaagctggtgaaccaattcaatgatctatctagggatgagtttgtctttctacttagt
agcaaggcaggtggctgtgggcttaatctggtaggtggaaatcgtttggttctctttgac
cctgattggaaccctgccaatgataagcaggctgctgctagagtatggagagatggacag
aaaaagagagtctacatttataggttcttaagcgcaggaaccatcgaggagaaggtatat
cagcgtcaaatgtcgaaagaaggcctccaaaaagttattcagcaggagcaagcggacaac
aaaatgcaggggagttctctttcaacagaagatctgcgtgatctttttacttttcatgaa
catgtcaggtctgaaatacatgaaaatttgaagtgtagccgctgtgacaaggatggaaat
tcagctttggatggtactggttttgcagccactgatcataaggcttcaattccaggagtg
caagattatgctgatattggtaggtttggagagatatctggatgtttgcagaaaatgaat
agcgcacatcaccagattggaagacctactgaagaagacctaggaagttggggacatcac
tttgatccatcaactgtacctgatactgtactgcagtgttctgctggtgaagaggtttct
tttgttttcaccaatcaggttgatggaaaacttgttccagttgaatctatggtgcgatca
gcagctcatcaacaaaatggaatagtagacactggagaaaaaggagtgcagaaaaccgat
tctcctagcaaacctggaaggcaatccttaaatggcaagaatttgaagttgatgggattt
aatttaaagaattcgtctttgaaatgttcaaccaaatccagaacatcaccaaattgcttg
caaggattgaagaaaaccagcccctctttggatcaacctcaaagtaaaaagcttcatgtt
gcttctgatatatctgatgatgattttgtttga
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