Miscanthus floridulus: 136464589
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Entry
136464589 CDS
T10264
Name
(RefSeq) homeobox-leucine zipper protein ROC8-like
KO
K09338
homeobox-leucine zipper protein
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136464589
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
136464589
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
136464589
NCBI-ProteinID:
XP_066319636
LinkDB
All DBs
Position
7:complement(123781515..123785750)
Genome browser
AA seq
707 aa
AA seq
DB search
MDFGDDVMDGGSDAQRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGLEPRQ
IKFWFQNRRTQMKAQHERQDNCFLRAENDKIRCENIAMREALRNVICPTCGGPPVTDDYF
DEQKLRMENARLKEELDRVSSLTSKYLGRPITQLPPVQPLSMSSSLDLSVGGLGSPSLGP
SLDLDLLSGGSSGYPPFHLPMTVSEMDRPMMAEMATRAMDELIRMAQAGEHLWVKTAGGG
PDGREVLNVDTYDSIFAKPGGSFRGPDVHVEGSRDSGLVFMSAIGLVDMFMDSSNWMEFF
PAIVSKARTIDVLVNGMAGRSESLVLMYEELHVMSPVVPTREFCFLRYCRQIEHGLWAIA
DISVDLQQRDARFGAPPSRSCRLPSGCLIADMADGSSKVTWVEHMEIEDRVPIHLLYRDL
ILSGAAFGAHRWLAALQRACERCACLATAGMPHRDIAAAGVTPEGKRSMMKLSQRMVSSF
FASLSASQLHRWTTLSGPNDVGVRVMVHRSTHPGQPSGVVLSAATSIWLPVPCDRVFAFV
RDEHTRSQWDVLSHGNPVQEVSRIPNGSHPGNCISLLRGLNASQNSMLILQESCTDASGS
LVVYAPIDIPAANVVMSGEDPSTIPLLPSGFTILPDGRPGASSSSSSSAAGPLGAPAAAG
SLVTVAFQILVSSLPSSKLNAESVATVNSLISTTVEQIKAALNCASH
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggacttcggcgacgacgtcatggacggcggctccgacgcccagcgccgcaagaagaga
taccaccgccacaccccgcgccagattcagcagctcgaggcgatgttcaaggagtgcccg
cacccggacgagaaccagcggatgcagctgagccgggagctggggctggagccccggcag
atcaagttctggttccagaaccgccggacgcagatgaaggcgcagcacgagcggcaggac
aactgcttcctgcgcgcggagaacgacaagatccggtgcgagaacatcgccatgcgggag
gcgctccggaacgtcatctgccccacctgcggcggcccgcccgtcaccgacgactacttc
gacgagcagaagctgcgcatggagaacgcgcggctcaaggaagagcttgaccgggtgtcc
agcctgacgtccaagtacctgggtcgccccatcacgcagctgccgccggtgcagccgctg
tccatgtcgtcgtcgctggacctgtccgtcggcgggctcggcagcccgtcgctgggcccg
tcgctggacctcgacctcctcagcggtggctcctcggggtaccctccgttccacctcccc
atgacggtgtcggagatggaccggcccatgatggctgagatggcgacgcgcgccatggac
gagctcatcaggatggcgcaggccggcgagcacctgtgggtcaagacggcgggcggcggc
cccgacgggcgcgaggtgctcaacgtcgacacgtacgacagcatcttcgccaagcccggg
ggctcgttccgcggccccgacgtgcatgtcgagggctcccgcgactcgggcctcgtcttc
atgagcgccatcggcctcgtcgacatgttcatggactcgagcaactggatggagttcttc
cctgccatcgtgtccaaggcgcgcacgatcgacgtcctcgtgaacggcatggccgggcgg
agcgagtctttggttctgatgtacgaggagctgcacgtgatgtcgccggtcgtcccgacg
cgcgagttctgcttcctccgctactgccggcagatcgagcacgggctgtgggcgatcgcc
gacatctcggtggacctgcagcagcgcgacgcaaggttcggcgcgccgccgtcacgctcg
tgccgcctcccatcgggctgcctcatcgccgatatggccgatggctcctccaaggtgacc
tgggtcgagcacatggagatcgaggacagggttcccatccacctgctctaccgcgacctc
atcctcagcggcgccgcgttcggggcgcaccggtggctcgccgcgctgcagagggcgtgc
gagcggtgcgcgtgccttgccacggccggcatgccgcaccgggacattgcagctgcagga
gtgacgccggaagggaagcggagcatgatgaagctgtcgcagcggatggtgagcagcttc
ttcgcgagtctgagcgcgtcgcagctccaccggtggacgacgctgtcggggcccaacgac
gtgggcgtccgcgtcatggtgcaccgcagcacgcacccggggcagcccagcggcgtggtg
ctcagcgcggccacgtccatctggctgccggtcccgtgcgaccgggtgttcgccttcgtc
cgcgacgagcacacgcgctcccagtgggacgtgctgtcgcacggcaacccggtgcaggag
gtgtcgcgcatccccaacggctcccaccctggaaactgcatctccttgctcagaggcctg
aacgcgagccagaacagcatgctgatcctgcaggagagctgcaccgacgcgtctggctcg
ctggtggtgtacgcgccgatcgacatcccggcggccaacgtggtgatgagcggcgaggac
ccgtccacgatcccgctcctgccgtccggcttcaccatcctgcccgacgggcggcccggc
gcgtcgtcgtcgtcgtcgtcgagcgctgcgggcccgctgggcgccccggcggcggctggg
tcgctggtgacggtggcgttccagatcctggtgagcagcctgccgtcgtcgaaactgaac
gccgagtcggtggcgacggtcaacagcctcatcagcaccactgtggagcaaattaaggcg
gccttgaattgcgccagccattga
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