Miscanthus floridulus: 136464627
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Entry
136464627 CDS
T10264
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
mflo Miscanthus floridulus
Pathway
mflo03030
DNA replication
mflo03420
Nucleotide excision repair
mflo03430
Mismatch repair
mflo03440
Homologous recombination
mflo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136464627
03420 Nucleotide excision repair
136464627
03430 Mismatch repair
136464627
03440 Homologous recombination
136464627
03460 Fanconi anemia pathway
136464627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136464627
03032 DNA replication proteins [BR:
mflo03032
]
136464627
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136464627
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
136464627
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
136464627
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
136464627
MMR (mismatch excision repair)
136464627
DSBR (double strand breaks repair)
HR (homologous recombination)
136464627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
OB_MEIOB_N
CDC24_OB3
DUF223
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
136464627
NCBI-ProteinID:
XP_066319678
LinkDB
All DBs
Position
7:complement(125118096..125121312)
Genome browser
AA seq
652 aa
AA seq
DB search
MARAKLTPNAVAAAMAGDTNLKPVVQVVDLRSIAVTGGSRLRFRAIISDGVATGHALFAS
QLCDLARSGVVRRGSVVQLLDYIVNDVGSNRNRKAIVILNMEVLAAECEIIGNPALPPDS
GDSNSMRADQFNGAPQNGSMAGSALNKVARPSDNAQVIQRSMAGNSLNMVPRPSDNAQVF
QPTVQPSYRPAPKYRNHGTIMKNDAPARITPISTLNPYQGRWAIKGRVTAKGEIRRYHNA
KGDGKVFSFDLLDSDGGEIRATCFNTLVDRFYEVVEVGKVYVVSRGNLKPAKKDYNHLNN
EWEIFLEFQSTIELCLDENSSIPAQRFSFSSIDKIEDSENNAIVDVIGVVTSVNPSTTIQ
RKNGMEAQKRTITLKDMSGRSVELTMWGDFCNREGLQLQEMVECGAFPVLAVKAGKVNDY
SGKSVGTISSSQLIINPDLAEAHSLRQWFDCGGRDASTQSISRDFTPSASRNEIRKTIAQ
IKDDGLGMGDKPDWVTVKAAVTFIKTDPFCYTACPNVVGDRQCGKKVTKSDSGNWLCDKC
NQEFPECDYRYLLQLNIQDHTGTTSATAFQEAGQELLGCSARELNMFKENEDPRYTAVLI
HCLYQNYLLRLKVKEEQYGDERRVKNTVAKVERVDPLAESKFLLDSISRFIV
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcgagggcgaagctgacccccaacgccgtggcggcggcgatggcgggggacaccaac
ctcaagccggtggtgcaggtcgtcgacctccggagcatcgcggtcactgggggctccagg
ctcaggttccgcgccatcatctccgatggcgtcgccacggggcacgcgctcttcgcctcg
cagctctgcgacctcgcgcgctccggcgtcgtccgccgcggctcggtcgtgcagctcctc
gactacatcgtcaacgacgtcggctccaaccggaacagaaaggctattgttattctgaac
atggaggttcttgctgcagagtgtgagattattggaaatccagcactacctcctgattct
ggagattctaattccatgagagcagaccagtttaatggagcacctcaaaatggttcaatg
gcagggagtgctttgaacaaagtggcaaggccctctgacaatgctcaagtaatccagaga
tcgatggcagggaactctttgaacatggtccctaggccaagtgacaatgcacaggtcttc
caaccaacagtacagccatcctatcgccctgcacccaagtacagaaaccatggcacaatc
atgaaaaacgatgctcctgctagaataacccccatatctactctaaatccttatcagggc
cgctgggctatcaagggtcgagtaactgccaaaggagagatccgccggtaccataatgca
aaaggtgatggcaaagtgttctcttttgacctgcttgattctgatggtggtgagattcgg
gctacatgtttcaatactcttgttgatcgcttctatgaagttgtggaagttggtaaggtc
tatgtggtatctagaggaaacttgaaacccgcaaagaaggactacaaccatctgaataat
gagtgggagattttcttggaatttcagtcgactattgaactttgtcttgatgagaacagt
tctattcctgcccagcggtttagcttctcatctattgataaaattgaagattcagagaac
aatgctattgttgatgtcattggtgttgttacatctgtcaaccctagtactacaatacag
aggaaaaatggtatggaagctcagaaaaggaccatcaccctgaaggatatgtctggtcga
agtgttgagcttaccatgtggggtgacttctgcaacagagaaggcttgcagctgcaagaa
atggttgaatgcggggcgtttcctgtcctggctgtcaaagctggaaaagtcaatgattac
agtgggaagtctgttggcacaatttcttcatctcaactcatcataaaccctgatcttgct
gaggctcattctctcaggcagtggtttgattgtggaggaagagatgcttctactcagtcc
atatccagggattttactccttcagcatcaaggaatgagatccgaaagacaatagcacag
ataaaggatgatggtcttggaatgggggacaaacccgattgggtcacggtgaaggctgct
gttacattcatcaaaaccgaccccttctgctacacagcttgccccaatgtggttggagac
aggcaatgtggtaaaaaggtgacaaagtctgattcaggcaactggctatgtgacaagtgc
aatcaagagtttccagagtgtgattacaggtatctcctgcagttgaacattcaagatcac
acgggaacaacttctgcgacagcatttcaagaggctggacaggagctacttggttgctca
gcacgagagctcaacatgtttaaagagaacgaagatcctcgctacacagctgtcttgatc
cattgcttgtatcagaattatttgttgaggctaaaagtgaaggaagaacaatacggcgac
gagcgacgagtgaagaacactgtggccaaggtggagagggtggatcctttggctgaaagt
aaatttctgcttgattccatttcaaggtttatagtatga
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