Miscanthus floridulus: 136466377
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Entry
136466377 CDS
T10264
Name
(RefSeq) DNA mismatch repair protein PMS1-like isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
mflo Miscanthus floridulus
Pathway
mflo03430
Mismatch repair
mflo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
136466377
03460 Fanconi anemia pathway
136466377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136466377
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
136466377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
L_lac_phage_MSP
ISPD_C
Motif
Other DBs
NCBI-GeneID:
136466377
NCBI-ProteinID:
XP_066320846
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Position
7:1420234..1435981
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AA seq
1002 aa
AA seq
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MAGGRGGAGRGESSPAIKPISKAVVHRICSGQVIFDLSSAVKELVENSLDAGATSVEVSL
KAYGEEWFKVADNGCGISPSNFQALALKHHTSKISDFSDLGSVVTFGFRGEALSSLCALG
KLTVETRSKDEPVGTHLEFEHSGVVVSERKTARQVGTTVTVEKLFSTLPVRSKEFSRNIR
KEYGKVISLLNAYALIAKGVRLLCTNTVGKNSKMVVLRTQGSNSMKDNIITVFGPNTFKC
LEPFSVTTSDGCQIEGFLSKPGPGTGRSSGDRQFFYVNGRPIDMPKVTKLVNELYKSSNA
KQYPVVILDFRIPTTSYDVNVAPDKRKVFFSSEIMILQSLREAVENLYSPLQCSFSVNHI
TDPEKEGDAVTDGHNEDTNAITMANVSASDNIDEDEETDSEDHVSPENQELPSSVAKVAI
EATSRDASPLSRGTATQADRSAWLPSFAYDQPKRSPKEGKSFALGTNRFRTGLAAKSTHS
STIQSSLMNFVSLNKRKHEDDCTLISETPVLRRGTCSEQVRRSSLEENFVTPEKQNREDD
CIISEAPVLRSGTCSELDSRTSLEADFASPNKQKHDDNCTLISETPVLRRGTNSEQVRGT
SLEANSAPALSSSTYNISEFNLPLETNSLKQHPPQSFGSVRTDVSPQHSKQPNIVTLRAE
VSGPCDVHTTESDVDEHHGRCFSASGAPNKYSESRHQNASADSPLPDAQDYDDGAVVCYA
PVQYPTIQFTVAELRRRRKNGYMVSHTNKPYCLEKATRCYKAATLDINVPLADEAKSNSL
AAATNELDRLFSKDDFGEMEVVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFECLSQSTT
LNVQPLLQPLRLDLSPEEEVIVSMNMSTIRKNGFVLAEDLHASPGNHYLLKAVPFSKNIT
FGVQDVKELISMLADSQGDCSIISSYKLDTTDSVCPSRVRAMLASRACRMSTMIGDPLTK
VEMKKILKNLTGLRSPWNCPHGRPTMRHLADLRTMKNKDITF
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggacggggaggcgccgggcgcggcgaatcctcgccggcgatcaagccaatc
agtaaggcggtggtgcaccgcatctgctctggccaggtcatcttcgacctttcctccgcc
gtcaaggagctcgtcgagaacagcctcgacgcgggcgccacctccgtcgaggtcagcctc
aaggcctacggcgaggagtggttcaaggtggccgacaacggatgcggcatatctccctcc
aacttccaggctcttgctcttaagcaccacacgtcgaagatatcggatttctccgacctc
ggatccgtggttaccttcgggttccggggcgaagctctgagttcgctctgcgcgctgggg
aaactgacggttgagacgaggagcaaggatgagcccgttgggacgcatttggagttcgag
cactcgggcgtggtggttagtgagaggaagaccgcacggcaggttggaaccacggtgaca
gtagagaaattgttctccaccttgccagtccggagcaaggagtttagcaggaacattcgg
aaggagtatgggaaagtgatctctctgctgaacgcttatgccttgattgccaaaggggtc
agattactctgcactaatactgttggaaaaaattctaaaatggttgtgcttagaactcaa
ggaagcaattctatgaaagacaatatcattactgtatttggtccaaatactttcaaatgt
ctggagcccttcagtgttaccacctcggatggctgccaaatagagggctttctttcaaaa
cctggacctggtactggccgcagttcaggagatagacaatttttctatgtgaatggcaga
cctattgatatgccaaaggtcacaaaacttgtcaacgagctatacaaaagttcaaatgcc
aagcaatatcctgtggttatcctggatttccgtattccaactacatcctacgatgtgaat
gttgcacctgataagagaaaagttttcttctcgtccgagatcatgattctgcagtcttta
cgtgaagctgttgaaaatctgtactcccctctgcaatgcagtttctcagtcaatcacatc
acagatcctgaaaaggaaggggatgctgttactgatgggcataatgaagatacaaatgct
atcacaatggcgaatgtctcagcttccgacaatattgatgaagatgaagaaacagacagt
gaggatcatgtttccccagagaaccaggaattgccttcttcagtggcaaaggtagccatt
gaagcaacgtctagagatgcaagccccttgtcaagaggcacagccactcaggctgataga
tctgcttggcttccatccttcgcatatgaccagccaaaaagatcgcctaaagaaggaaaa
agttttgcattgggaacaaatcgtttcagaactgggcttgctgcaaaatctactcattca
agtaccattcagtcttctcttatgaactttgtatcactaaacaagcggaagcatgaagac
gactgcactcttatttctgaaactccagtgctgagaagagggacatgctcagaacaagtg
aggagatcaagtttagaagaaaactttgttacaccagaaaagcagaaccgtgaagatgat
tgcattatttctgaagctccagtgctgagaagtgggacatgctctgaactagacagcaga
acaagtttagaagccgacttcgcatcaccaaataagcagaagcatgatgacaattgcact
cttatttccgaaaccccagtgttgagaagagggacaaactcagaacaggtgaggggaacg
agtttagaagcaaattcagcacctgcattaagctcaagcacgtacaatatttctgagttc
aatttacctctggaaacaaactctttaaaacagcatcccccacaatcttttggatctgtg
aggacagatgtttcaccacagcattctaaacaacctaatattgtgacccttagggcggag
gtatcaggtccatgtgatgttcacactacagaatctgatgtggatgaacatcatggtcga
tgcttttcagcttctggtgctcccaacaaatattcagaatcacgacatcagaatgcatcg
gctgatagtcctttgcctgatgctcaggattatgatgacggtgctgtagtatgttatgca
cctgtacaatatcccactattcaatttacggttgccgagcttaggagaagaagaaagaat
ggttatatggtatcccatacaaataaaccatattgtcttgagaaagcaacaaggtgctat
aaagctgcaacactggatattaatgtacccttagctgatgaggcaaaatcaaattcatta
gctgcagccaccaatgagttggacaggcttttcagtaaagatgattttggagaaatggag
gttgttgggcaatttaatctgggttttatcattggaaagctcgaccaggatctgtttatt
gtagatcagcatgctgctgatgagaagtacaactttgagtgcctttcacagtcaacaact
ttaaacgtacagcctcttctccagccactgagacttgatctatcaccagaggaagaagta
attgtttctatgaacatgagcaccatcagaaaaaatggttttgttctggcagaagatttg
catgcttcccctggtaaccattatcttttgaaagctgtgcctttcagcaaaaatattacg
tttggtgttcaagatgtaaaggagctgatctccatgcttgctgatagtcaaggagactgt
tcaataataagtagctacaagctggatacaaccgattctgtttgcccttcgagggttcgt
gctatgttggcttctagggcttgccggatgtctactatgataggtgatccactaacaaaa
gtcgagatgaagaagatacttaaaaacctgacaggattaaggtccccttggaactgtcca
catgggagaccaacgatgcgtcacctagctgacctgcgtactatgaaaaacaaagatatc
acgttttaa
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