Miscanthus floridulus: 136466457
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Entry
136466457 CDS
T10264
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
136466457
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
HECT type E3
136466457
BRITE hierarchy
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GFIT
Other DBs
NCBI-GeneID:
136466457
NCBI-ProteinID:
XP_066320966
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Position
7:complement(6067323..6076806)
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AA seq
1834 aa
AA seq
DB search
METRSSSRKRAAAAASSSASKRPRRNSSASSSSAPPPQQPLMEPSPSSRRRSRAAAAADK
GKDPDPSSSDHPSPPAPDDDADVPFPQSFTSASTALQGLLRRLGAGLDDLLPSSSSAPSS
ATSGHLKRILAGLQAHGDESRQLQSLMQLCEMLSIGTEDSLAAFPVDAFVPILVGMLGRE
DEPATAGASPDVMLLAARALANLVDVLPSSCSAVVHYGAIQCFCARLLTIEYMDLAEQSL
QALKKISLEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANICRKLPSDASEFVMEA
VPLLTNLLNHHDSKVLEHASVCLTRIAEAFAHYPDKLDELCNHGLVAQAASLIAVGNSSG
QASLSTSTYTGLIRLLSICASGSLLAVKTLLLLGISGTLKDILSGSALISGASVSPAVTR
PADQMFEIVSLADDLLPHMPARIIKLPTYYHAYKGSSTKKSASIKQEGAGSTGNERSGRE
RLLREQPELLQQFGMDLLPTMTQVYGSSVNAPIRHKCLSIIGKLMYYSSAETIQSLLGTT
NISSFLAGILAWKDPQVLIPALQIAEIMMEKLPETFSKLFVREGVVHAVELLICSESSNT
VPSQVPPQDKDNDSAMPSRPRRQRRRGGAVAAENSSFDESNSSNLGVTCSTTIASEAPNT
SLRFAVSDHAKSFKDKYFPADTDSSDIGITDDLLKLSALCAKLNTVSENVKTKVKGKSKA
ISANFLDISIDVEEQLDKIISEMLSELRKVNGVSTFEFIRSGVATALLDYLSCGTFGKEK
VSEGNLPQLRQLALRRYKSFISVALSIDHERDETPMALLVQKLQSALSSLERFPVVLSQS
SRIGIGGPRLTSGLSALAQPFKLRLSRAQGEKSLRDYSSNIVLIDPFASLAAVEEFLWPR
VQRSEVASKPTVPSGNNSESGVPGTTTGASLTAAMAQSGRRPTTRSKSSAGGGTSKKDSH
DESTSTAKGKGKAIVKPNSDEPKGPNTRNAARQTSASEKDSEMKRAHGHSSSEDEELDTS
PVEIDDALMIDDDDISDDDDDDDDDDHEVLQEGSLPICSQDGVHDVKLGDADECNISSAS
FSQAQPSSGSGARNTSSRGPDSTEFRSMSTFGSRGAMSFVAATMAGLASVGGRSVRGGRD
RRGLSLGGSMNDHNKLIFTAGGKQLSKHLTVYQAIQRQLMLDEDDEERFNGSDIPNDGNR
FWGDVFTITYQKADNQVEKGCQGTSTSLNIKSDSYRSISEAQGVSLLDSILQGELPCDLE
RTNSTYNILALLRVLEGLNQLSSRLRLQGASNDFAEGKITTLDELYRTGAKVPSEVFVNS
KLTPKLARQMQDVLALCSGSLPSWCYQMTKACPFLFPFETRRQYFYSTAFGLSRALNRLQ
QQQSDNHSSGGEREVRFGRLQRQKVRVSRNRILDSAAKVMEMFSSQRAVLEVEYFGEVGT
GLGPTLEFYTLLSHELQSAQLGLWRSTSYDSGLHIDRKDVISLDPEDGSSGKGPNTDLPG
DGRHLIQAPLGLFPRPWPPKVDASEGSRFFKVLEHFRLIGQVMAKVLQDGRLLDLPLSTA
FYKLILGQELDLFDIVSFDSEFGKTLQELRVLVERKQFLESTCGKNQLQVADLRFHGASI
EDLCLDFTLPGYPDYVLKEGEGGTIVNIYNLEEYITLVVDATVKSGIKRQVEAFRSGFNQ
VFDMSSLHIFSPQELDYLICGRQEIWELESLVDNIKFDHGYTAKSPAIVNLLEILSEFTP
EQQHAFCQFVTGAPRLPPGGLAALNPKLTIVRKHPSSAVNASNSTGATESADDDLPSVMT
CANYLKLPPYSTKEIMRKKLLYAILEGRGSFDLS
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggaaacacgcagcagcagtcgcaagcgcgcagcggccgccgcctcctcgtccgcctcc
aagcgcccccgccgcaactcctccgcctcctcctcctcagcgccgccgccccagcagcca
ctgatggaaccctcgccctcctcccgccgccgctcccgcgccgccgccgccgccgacaag
ggcaaggaccccgacccctcctcctccgaccacccttctccccccgcccccgacgatgac
gccgacgtccccttcccccagtccttcacctccgccagcaccgccctccagggtctcctc
cgcaggctcggtgccggcctcgacgacctcctcccctcctcctcctcagcgccctcctcc
gccacgtccggtcacctcaagaggatcctcgccggcctgcaggcgcacggcgacgagtcg
cgccagctccagtccctcatgcagctctgcgagatgctctccatcggcaccgaggactcg
ctcgccgccttccccgtcgacgccttcgtcccaatcctcgtcgggatgctcggccgcgag
gacgagcctgccaccgctggtgccagccccgacgtcatgctgctcgctgcgcgggcactg
gccaacctcgttgatgtgctcccctcctcctgctccgcggtcgtgcactacggggccata
cagtgcttctgtgctcgactgctcaccatagagtacatggacctcgccgagcagtctcta
caagcccttaagaagatctctctggagcacccaaccgcctgtttgcgagctggtgcgcta
atggctgttctatcgtatcttgacttcttctccactggggttcagagggtagccttgtct
accgccgcaaatatttgcaggaagctgccgtccgatgcttctgagtttgtcatggaagct
gtcccattgctcacgaatctcctaaatcaccacgattccaaagtactagagcatgcttct
gtttgtttgacacgcattgctgaagcttttgcccattaccccgacaaacttgatgaactc
tgcaatcatggattagttgctcaagctgctagcttgatagctgttggcaactcctctggc
caggcatcactgagtacatccacatatacgggcttaatccgtcttctctcaatatgtgca
agtggatccctgctggcagttaaaacactgcttcttcttgggatcagcggcactcttaaa
gacatcctttctggctctgctttgatttctggagcatcagtctcccctgctgtaacaagg
cctgccgatcagatgtttgagattgtgagccttgctgatgatttacttccgcatatgcct
gcgagaatcattaagttaccaacatactaccatgcatataaaggctcttcaacaaagaaa
tctgcttccatcaaacaagagggggctggttcaacaggaaatgaaaggtctggccgtgag
aggctattgcgtgagcaacctgagctcctacagcagtttggtatggatttgttacccaca
atgacacaggtgtatggttctagtgtaaatgcaccaatacgtcacaagtgtttatcgatc
attgggaagttaatgtactacagctctgctgagacaatccagtctctccttggcacaaca
aacatatccagcttccttgcaggcattcttgcatggaaagatcctcaagtgttgattcct
gctcttcagatagcagaaataatgatggaaaaacttccagagacattttccaagctgttt
gtgagggaaggtgtcgttcatgccgtggagttacttatatgttcggaatcttccaacaca
gtgccttctcaggtgccacctcaggataaagataatgattctgccatgccatcacgtcct
agacgtcaacgccggcgtgggggtgctgtggcagcagaaaatagttcattcgatgaatca
aatagttccaaccttggggttacgtgctcaacaacgatcgcttcagaagctccaaacacc
agccttcgtttcgcagttagcgaccatgcaaagtctttcaaagataaatacttcccagca
gacactgattcaagtgatattgggattactgatgaccttcttaaactgagtgcactctgt
gcaaagttgaatactgtatctgagaatgtcaaaacaaaagtcaaagggaaatcaaaagct
ataagcgctaattttttggatatctcaattgatgtcgaagaacagttagacaaaataata
tctgaaatgctctctgagcttaggaaagttaatggtgtttccacatttgaattcattaga
agtggtgttgccacagcattgcttgactatttgtcttgtgggacatttgggaaggaaaag
gtatctgaaggaaacctacctcagcttcgtcagctggcccttaggcgatacaagtccttc
atatctgttgccctttctattgatcatgaacgggatgaaactcccatggcactgttggtt
cagaaactgcaaagtgcattgtcttcgctggaacgtttccctgttgtgctcagccagtct
agtaggattggtattggagggccacgtctgacttcaggtcttagtgctctggctcaaccc
ttcaagcttcgtctgtcccgagctcaaggcgaaaaatcgcttcgggattattcatcaaat
attgtgcttatcgatccatttgccagtctagcagctgttgaagaattcctttggcccaga
gttcaacgcagtgaggttgcgtcaaagcctacagttccatctggtaataattctgaatct
ggggttcctggcaccacaactggtgcatcattaacagctgcaatggctcaatctggtcgg
cgtccaacaacaagatcaaagtcatctgcagggggtggtacatctaagaaggattctcat
gatgaaagcactagtactgccaaagggaaaggcaaagctattgtaaagccaaactcagat
gaaccaaaaggacctaatacaaggaatgctgcccgccaaacatctgcttcagagaaagat
tcggaaatgaagcgagcacatggccacagtagttcagaggatgaagagcttgacacatct
cctgttgaaattgatgatgctttgatgattgatgatgatgacatttcagatgatgatgac
gacgacgacgatgatgatcatgaggttctccaagaagggtctcttccaatctgttctcaa
gatggtgtgcatgatgtgaaactgggtgatgccgatgagtgtaacattagctcagccagt
tttagccaggcgcagccatcatctggttccggtgctagaaacacttctagcaggggaccg
gattctactgaatttcgaagtatgagcacattcggttcacgaggtgcaatgtcatttgtt
gctgcaacgatggctgggctggcttctgttggtggtcgcagtgttagaggtggccgagat
cggcgtggtctgtcacttggaggtagcatgaatgatcacaataaacttatattcactgct
ggtgggaagcagcttagcaaacatttgactgtatatcaagctatccaacgtcaacttatg
ctcgacgaggatgatgaagaaaggtttaatggatctgatataccgaacgatggaaaccgc
ttctggggtgatgtgttcacaataacgtaccagaaggctgataaccaagttgagaaggga
tgccaagggacttccacctcgttaaacataaaatcagattcttacaggtctatctctgaa
gcacaaggggtttctcttcttgatagcatcttacaaggagaacttccttgtgatcttgag
agaacaaactcaacatacaacattttagcattattgcgtgtactggaggggcttaatcag
ttatcctctcgtttaagactacagggagcatctaatgattttgctgagggaaaaatcact
accttggatgagctatatagaactggagccaaggtaccttccgaagtgtttgtcaatagc
aaattgacaccaaagcttgctcggcaaatgcaggatgttctcgcactatgtagtggcagt
ttaccttcttggtgttatcaaatgaccaaggcctgcccatttctgtttccttttgagaca
aggaggcagtacttctattccacggcctttgggttgtcgcgagcattgaatcgacttcag
caacagcagagtgacaatcacagctctggtggtgaaagagaggtccggtttggcaggtta
caacgtcagaaagttcgtgtttcccgtaaccgtattctagattctgctgctaaagttatg
gagatgttctccagtcagagggctgttcttgaggtggaatactttggcgaagttggaact
gggctggggcctactttggagttttatactctcttaagccatgaactacaaagcgctcaa
ctgggattatggagatctacttcatatgattcaggattgcacattgataggaaggatgtg
attagtttagatcctgaagatggctcgtcaggaaaaggacccaacacagatctaccaggt
gatggcaggcatttgatacaagctcctcttggattgttccctcgaccttggccacctaaa
gttgatgcttcagaaggtagcagattcttcaaagttttggagcatttccgcttaataggt
caagtgatggcaaaagtcctgcaagatggcagacttttagatttgcctttatcaacagcg
ttttataagcttatacttggacaggagcttgatttgtttgacatagtctcatttgattct
gagtttgggaagacattgcaagaactgcgagttcttgttgaacgaaagcagttccttgaa
tccacttgtggcaagaatcagctacaagttgcagatttgcgtttccatggcgcttctatt
gaagatttgtgtttagattttacccttccaggttatcctgattatgtgctcaaagagggt
gaaggaggcacaattgttaatatttacaatttagaagagtatattactttggtagtggat
gctacagttaagtcagggataaagcgacaggttgaggcatttagatcagggtttaatcag
gtgtttgacatgtcatccctccacatattttcacctcaagaacttgactatctaatatgt
ggccgacaagaaatttgggagttggaatccctggtggataacataaaatttgatcatgga
tatactgctaaaagtcctgcgatcgtgaatctactcgagattttgtcagaattcacccct
gagcagcagcatgcgttctgccagtttgtaactggtgctcctcggcttccacccggtgga
ttggcagcccttaatcccaagcttactatagttaggaagcacccttcaagtgctgtgaat
gcttcaaattcaactggggcaacagagtctgctgatgatgatttgcctagtgtgatgacg
tgcgccaattatctgaagctgcccccgtactccacaaaagaaatcatgcgcaagaagttg
ctttatgcgatcctggaaggccgaggatcgtttgatctttcataa
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