KEGG   Miscanthus floridulus: 136466519
Entry
136466519         CDS       T10264                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K20178  vacuolar protein sorting-associated protein 8
Organism
mflo  Miscanthus floridulus
Pathway
mflo04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    136466519
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mflo04131]
    136466519
Membrane trafficking [BR:mflo04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    136466519
SSDB
Motif
Pfam: TPR_Vps8 Beta-prop_VPS8 VPS8_N TPR_VPS8_2 WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Clathrin Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_HPS5 Beta-prop_WDR5 TPR_Vps41 ANAPC4_WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40 Beta-prop_THOC3 zf-RING_2 WD40_Gbeta zf-RING_Vps41 WD40_Prp19 Herpes_pp85 zf_RING_Vps8 Beta-prop_WDR19_1st Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 136466519
NCBI-ProteinID: XP_066321053
LinkDB
Position
7:complement(10752641..10766448)
AA seq 1924 aa
MPASSSSPAMASQHAPTPRELDLDAFLPTSPTSSASSDADAADPDHRRAVDDLLRLLSSS
DSDSDSEESSRIPSSTSSGAPSRVQAPAPPAEPSPLPSPPPPPPPRRSASASPSETLSSL
VARTFSSNGASSSSRPLPSLFRGVRPSPKPGAALAAAAAASRAVLTPHAAAIKSRRSVSA
PVEKVLVEEGSGSEDSKELPPTGSLEAEVEEKGNSEAVAEATKQTADGSVGTELGEDKQA
EAGGEENAEAIKLVEASSLDSLVGEESSGHEQGDDVNLAETDQVVNQIEAVYEENGDGET
VDDNHVQSDQGMDLIGVVSEESSDDEQEFERSDSIMEEQVESGSLIDKVIEERVEQLEAS
RKAEKNAEKKLKVSMKPLEWAEELEKRQASFGQHWEEGAAAQPMQLEGIGKGPPAIGYMQ
IEMDNPVTRAMSSPSFRSDHGSPQVLAVHKSYIAMGTSKGAVIVIPSKYSIHQADDTDAK
MLFLWNQGERTRSPVTAMCFNQQGDLLLVGYGDGHMTIWDVQKSAAAKVIYGEHTAPVVH
ACFIRQSKAITGDSKGVVLLHTFSIIPVINRLTVKGTQRLFDGNTGIVLSACPLVMDESF
GFSNSSAQGNQTTSSSGGLGSMMGGVVGGVVGVDSGWKFFNEGSSPMEDGVVVMFIMHQH
ALVVRLRTNIDHVDHIETFSRPDGAREGSIAYAAWKYTSSLNESSSVDEERVSWLALAWD
RQVQVAKFVKSKIFKHKEWKLDSAAVGVAWLDDQMLVVLNLRGQLCLFSKDGSELRRTTF
VPDGLLFDDTILHHAHFFNRFGNPERHFNSSVAVRGATVYILGPSFLTVSRLLPWKERIE
ALKRAGDWMGALDMAMRLYDGQTQGVVDLPRTVDSIREAIMPYLVELLLSYISYVFEYIS
IALSNHTGKGGESDVLIEADRSLLTQRDEQYARVGGVAVEYCVHIGRNDILFDTVFSKFV
AAQSGGMFLEVLEPYILKDMLGSLPPEIMQALVEHYSGKGWLQRVEQCILHMDISSLDFN
QVVRLCREHGLYGALIYLFNQGLNDFHTPLEELLSVVQNTNSKDDTSSGYRMLVYLKYCF
QGLAFPPGHGIIPRSRLHSVREELLQFLLEESKPLTSEVFKGFNASCGKCLNICYLLWMD
TEATLEVLKCAFVQDNFEPRDELPSTVHTSVLGNEDSIDAGNPESQNTMVQNVVDAIIDI
VGLKNDVIRSVVMGNTESEVWPSEKDFSYLMEFVSFFVSHKRANASKRVVRHILTYLISS
YDDTRTRTQKEKEVLQLFNAVPQNDWNSDFVLNLCSDAHFYQACGLIFTTRNQNLAALDS
YMKDEEEPFHAFIFIDKKLLELVDDEALSFHITVISRFPELVKLSRECAFVLASDHFCDK
IQQILAELRSDRHSLFLFLKTAIEVHLSRKLDLSKLEARNKQTVELQYSSTDVEDYQQRL
SNLSKLCHNPVYIDDELVELYLELLCQYERRSVLKFLETFDSYRLERCLHLCLDYGVTDA
AAFLQERVGDVGSALDLILAGLDEKISLFISSVENTFSGVASKSISEIKQLDIVLEMSEA
HPVLDALHASIGLCQRNSQRLDPEESQSLWFQLLDSFSEPLKKLYGIKDVNGKGARSNWS
EAPMEHLKEKGLSQQMRISTKQKCLNVLRKVFSQCVGETIEAMAGYIPLPAIMAKLLSDN
GSQEFGDFKLVIHRMLSMYLYEKRILETAKSVIEDDSFYTLSLLKRGVCHGFAPQTFVCC
ICNCSLSKEGAISAVRLFSCGHATHLQCESEQTRSSNRESKEGCPVCLSTSDTQARSKSP
MFENGLMKYSGAEHELSHDIHQIHEVDHAERSRGLQQMSRYEILNNLQKAQKSFHIETVP
PLKLAPPAIYHEKIHKRTTSVGETSKHSVRIQKPQKIWQMKEQKSKQTGSRHPQKSSFLQ
PDSN
NT seq 5775 nt   +upstreamnt  +downstreamnt
atgccggcgtcgtcctcgtcgccggcgatggcgtcgcagcatgcgccgacgccgcgggag
ctcgacctcgacgctttcctcccgacgtctccgacctcctccgcgtcctccgacgccgac
gcagccgaccccgaccaccgccgcgccgtcgacgacctgctccgcctcctctcctcctca
gactccgactccgactccgaggagtccagccgcatccccagcagcaccagcagcggggcg
ccgtcccgtgtccaagccccggcgcctcccgctgagccctcgccgttgccgtccccgccc
ccgcccccgcccccgaggagatccgcatcggcctcgccgtcggagaccctctcctccctc
gtcgcgagaaccttctcgagcaacggcgcttcctcgtcgtcgaggcccctcccctcgctc
ttccggggcgtccgccccagccccaagcccggcgccgcacttgccgctgccgccgcagcg
tcccgcgcggtcctcaccccacacgccgctgccatcaagtcccgccgatcagtctcggcg
cccgtggagaaagttctggtggaagaggggagtggctccgaagactccaaggagctccct
cccactgggagcttggaagcagaggtagaagagaagggtaattcggaagcggttgctgag
gcgaccaagcaaactgcagatgggagtgtgggtacagaattgggagaggataaacaggca
gaagcgggaggtgaagagaatgctgaggctataaagctggtggaggcaagttctctggac
tctcttgttggagaggaatccagtgggcatgagcaaggtgatgatgtcaatttggcggaa
actgaccaagttgtgaatcaaattgaggctgtctatgaggaaaatggggatggcgaaact
gtagatgataatcatgtgcaatcagatcagggtatggatctaattggggttgtttccgag
gaaagttctgatgatgaacaggaatttgaaagatctgacagtatcatggaagaacaagtg
gaatctgggagcttaattgataaagtgattgaagagagggtagagcagctggaggccagc
aggaaggccgagaagaacgcagagaagaagctgaaggtgtcaatgaagccgttggagtgg
gcagaggagcttgagaagaggcaggcctcgtttggtcaacactgggaggaaggagcagct
gcgcagcccatgcaactagagggaatcggaaagggcccaccagctatcggttacatgcaa
attgagatggacaacccagtaactcgtgccatgtcctcaccatcgtttaggtcagaccat
ggatctccccaggtgctggctgttcataagagctatatagcaatgggcacatctaaaggt
gctgtcattgtcattccaagcaaatactccattcatcaagctgatgatacagatgcaaag
atgctgttcttatggaaccaaggcgagagaactcgatcaccagtgactgccatgtgcttt
aaccaacaaggggatcttctgctagtaggatatggtgatggtcatatgacaatttgggat
gtacagaaatctgcagcagcaaaagttatatatggcgagcatacagcaccagtagtgcat
gcttgttttatccgccaatctaaagccatcactggggattcaaagggggtagttctattg
cacacgttttccattatccccgtaattaatcgtttgactgtcaagggaactcagcgcctt
tttgatgggaatactggaattgtgctctcagcctgtcctcttgttatggatgaatctttt
ggttttagtaactcatctgcccagggaaatcagacaacttcctccagtggtggtcttggc
agcatgatgggtggtgttgttggaggtgtggttggagtagattctggatggaagtttttc
aatgaaggctcttctccaatggaggatggtgttgtagtcatgtttattatgcatcaacat
gctcttgtggttagactccgtaccaatattgaccatgttgaccatattgagaccttctct
agaccagatggagcacgtgagggctccattgcgtatgctgcgtggaaatacacatcatct
ttgaatgaatcgtcatcagtagatgaagaacgagtgtcatggctagcacttgcatgggac
cgtcaagtgcaagttgcaaagtttgttaaatctaagatatttaaacacaaggagtggaag
cttgatagtgcagctgttggtgttgcctggttggatgaccagatgttagtcgtccttaat
ttgagagggcagctctgtttattctctaaagacggcagtgagcttcgcagaactaccttt
gttcctgatggccttctttttgatgacacaatattgcaccatgcacatttttttaacagg
tttggtaacccagagaggcattttaacagttcagtagcagtaagaggtgctacagtgtat
attcttgggccatcttttctcacggtttcccgacttcttccatggaaagagcgaattgaa
gcactaaagagggctggcgattggatgggtgcactagacatggcaatgaggctttatgat
ggtcaaacacagggtgttgttgatctcccaagaacggttgattcgattagagaggccata
atgccttacctagtagaattgctgctatcgtatataagttatgtttttgaatatatttca
attgcactgtcaaatcatactggaaaagggggagaatcagatgttctaatagaggcagat
cgatccctgcttacacaaagagatgagcagtacgctcgtgtaggaggggttgcagttgag
tattgtgtccacattggacgtaatgatatccttttcgatacagtcttctctaagtttgtt
gctgcacaaagtggaggtatgtttctggaggtgctagagccttatatattgaaggatatg
cttggttctctgccccctgagatcatgcaagcactagtggagcattatagtggcaaagga
tggttgcagcgagttgaacaatgcatccttcacatggatatttcttcattggactttaat
caggtagtcagactttgtcgtgaacacgggctatacggtgcactaatttatttatttaac
caaggcctaaatgatttccatacacctctagaggaacttctatcagtagttcagaacacc
aacagtaaagatgatacttctagtggatacaggatgcttgtttatctgaaatattgcttt
cagggcttggcatttcctccagggcatgggataattccccgatcccggcttcattcagtg
agggaagaactcctgcaatttctgcttgaagagtctaagccactcacttctgaagtattt
aagggtttcaatgcttcttgtggaaagtgcctaaacatatgctatctgctatggatggat
actgaagctactttggaagtcctcaaatgtgcttttgtacaagataactttgaacctaga
gatgaacttccaagtactgtccatacatctgtcttaggcaatgaagatagtattgacgct
ggaaacccagagagccaaaatactatggtacaaaatgtagttgatgccatcattgacatt
gttggtttgaaaaatgatgtgattcggtccgttgtcatgggtaacactgaatcagaagtt
tggccttcggagaaggattttagctatttaatggagtttgtgtccttttttgtttcccac
aaaagggctaatgcatccaagagagttgttaggcacattcttacttatctcatttcatca
tatgatgacacaagaacaaggactcagaaagaaaaagaagttcttcaactcttcaatgcg
gttccccaaaatgattggaattcagattttgtcttgaacctttgttcagatgctcatttc
tatcaggcctgtggcttgatatttactactaggaatcagaatttggctgctttagatagt
tacatgaaggatgaagaggaacctttccatgcttttatcttcattgataaaaagttacta
gaattggttgatgatgaagctttgtcatttcatatcactgtaatatctcgctttcctgag
ctagtcaagctaagcagggagtgtgcatttgtcttggccagtgatcatttctgtgataag
atacagcaaatattagcagagcttcgttctgacagacacagcctctttcttttcttgaaa
actgctattgaagtacacttgtctagaaaacttgacctcagtaagcttgaagcaagaaac
aaacaaactgttgaactccagtactcttctactgatgttgaagattatcagcagaggcta
tcaaatctctccaagttatgccacaatcctgtttacatcgacgacgagttagttgaactc
tatctggagcttttatgtcagtatgagcgaaggtctgttctgaagtttctggagactttt
gacagttacagattggagcggtgcttgcatctttgcctagattatggagttacagatgct
gctgcattcttgcaagagagggttggtgatgttgggagtgccttagaccttattctggct
ggacttgatgagaaaattagcctatttatctcttctgtggaaaatactttctctggtgtc
gcatcaaaaagtatctctgaaattaagcaactagacattgttctagaaatgagtgaggct
catccagtgcttgatgcattgcatgcctccattggattgtgccaaaggaattcacagcgc
ttggacccagaggaatctcagtccctttggttccaattgcttgactccttctcagagcca
ttaaaaaaattgtatggaatcaaggatgttaatggaaaaggtgccaggtcaaattggagt
gaagcaccaatggaacatctgaaggaaaaaggactatctcaacaaatgaggatttcaact
aaacaaaagtgcctaaatgttctgcgaaaagtattttcacaatgtgttggagaaacaata
gaggccatggctgggtatatacccctaccagcaatcatggcaaaactgttatccgataat
gggagtcaagagtttggtgatttcaaacttgtgatacacagaatgttatctatgtatctt
tacgaaaaaagaatactggaaacagctaagtcagtaattgaggatgactcattttatacc
ttgagcttattaaagagaggagtttgtcatgggtttgctccacagacttttgtatgctgc
atatgcaactgctcactttctaaagaaggtgctatttcagccgtacggttgttcagttgt
gggcatgcaacacatcttcagtgtgagtctgagcagaccaggtcatccaatcgggaatcc
aaagagggatgccctgtctgtctctcgacgagtgatacacaagctcgaagcaaatcacct
atgtttgagaatgggctaatgaagtattctggggctgaacatgaattgtcacatgacatc
catcagattcatgaagttgatcatgctgagagatctcgtgggcttcaacagatgtcacgg
tatgaaatactgaataatcttcagaaagcgcagaagtcctttcatatagaaaccgtacct
ccattgaaacttgcaccgccagctatatatcatgagaagatacacaagaggaccacttca
gttggtgaaactagcaaacattcagttagaattcagaaaccccagaaaatatggcaaatg
aaggagcaaaaatcaaaacagactgggagtcgtcatccacaaaagtcaagttttctacaa
ccagattcaaactga

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