Miscanthus floridulus: 136466519
Help
Entry
136466519 CDS
T10264
Name
(RefSeq) uncharacterized protein isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
mflo Miscanthus floridulus
Pathway
mflo04148
Efferocytosis
Brite
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
136466519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136466519
NCBI-ProteinID:
XP_066321053
LinkDB
All DBs
Position
7:complement(10752641..10766448)
Genome browser
AA seq
1924 aa
AA seq
DB search
MPASSSSPAMASQHAPTPRELDLDAFLPTSPTSSASSDADAADPDHRRAVDDLLRLLSSS
DSDSDSEESSRIPSSTSSGAPSRVQAPAPPAEPSPLPSPPPPPPPRRSASASPSETLSSL
VARTFSSNGASSSSRPLPSLFRGVRPSPKPGAALAAAAAASRAVLTPHAAAIKSRRSVSA
PVEKVLVEEGSGSEDSKELPPTGSLEAEVEEKGNSEAVAEATKQTADGSVGTELGEDKQA
EAGGEENAEAIKLVEASSLDSLVGEESSGHEQGDDVNLAETDQVVNQIEAVYEENGDGET
VDDNHVQSDQGMDLIGVVSEESSDDEQEFERSDSIMEEQVESGSLIDKVIEERVEQLEAS
RKAEKNAEKKLKVSMKPLEWAEELEKRQASFGQHWEEGAAAQPMQLEGIGKGPPAIGYMQ
IEMDNPVTRAMSSPSFRSDHGSPQVLAVHKSYIAMGTSKGAVIVIPSKYSIHQADDTDAK
MLFLWNQGERTRSPVTAMCFNQQGDLLLVGYGDGHMTIWDVQKSAAAKVIYGEHTAPVVH
ACFIRQSKAITGDSKGVVLLHTFSIIPVINRLTVKGTQRLFDGNTGIVLSACPLVMDESF
GFSNSSAQGNQTTSSSGGLGSMMGGVVGGVVGVDSGWKFFNEGSSPMEDGVVVMFIMHQH
ALVVRLRTNIDHVDHIETFSRPDGAREGSIAYAAWKYTSSLNESSSVDEERVSWLALAWD
RQVQVAKFVKSKIFKHKEWKLDSAAVGVAWLDDQMLVVLNLRGQLCLFSKDGSELRRTTF
VPDGLLFDDTILHHAHFFNRFGNPERHFNSSVAVRGATVYILGPSFLTVSRLLPWKERIE
ALKRAGDWMGALDMAMRLYDGQTQGVVDLPRTVDSIREAIMPYLVELLLSYISYVFEYIS
IALSNHTGKGGESDVLIEADRSLLTQRDEQYARVGGVAVEYCVHIGRNDILFDTVFSKFV
AAQSGGMFLEVLEPYILKDMLGSLPPEIMQALVEHYSGKGWLQRVEQCILHMDISSLDFN
QVVRLCREHGLYGALIYLFNQGLNDFHTPLEELLSVVQNTNSKDDTSSGYRMLVYLKYCF
QGLAFPPGHGIIPRSRLHSVREELLQFLLEESKPLTSEVFKGFNASCGKCLNICYLLWMD
TEATLEVLKCAFVQDNFEPRDELPSTVHTSVLGNEDSIDAGNPESQNTMVQNVVDAIIDI
VGLKNDVIRSVVMGNTESEVWPSEKDFSYLMEFVSFFVSHKRANASKRVVRHILTYLISS
YDDTRTRTQKEKEVLQLFNAVPQNDWNSDFVLNLCSDAHFYQACGLIFTTRNQNLAALDS
YMKDEEEPFHAFIFIDKKLLELVDDEALSFHITVISRFPELVKLSRECAFVLASDHFCDK
IQQILAELRSDRHSLFLFLKTAIEVHLSRKLDLSKLEARNKQTVELQYSSTDVEDYQQRL
SNLSKLCHNPVYIDDELVELYLELLCQYERRSVLKFLETFDSYRLERCLHLCLDYGVTDA
AAFLQERVGDVGSALDLILAGLDEKISLFISSVENTFSGVASKSISEIKQLDIVLEMSEA
HPVLDALHASIGLCQRNSQRLDPEESQSLWFQLLDSFSEPLKKLYGIKDVNGKGARSNWS
EAPMEHLKEKGLSQQMRISTKQKCLNVLRKVFSQCVGETIEAMAGYIPLPAIMAKLLSDN
GSQEFGDFKLVIHRMLSMYLYEKRILETAKSVIEDDSFYTLSLLKRGVCHGFAPQTFVCC
ICNCSLSKEGAISAVRLFSCGHATHLQCESEQTRSSNRESKEGCPVCLSTSDTQARSKSP
MFENGLMKYSGAEHELSHDIHQIHEVDHAERSRGLQQMSRYEILNNLQKAQKSFHIETVP
PLKLAPPAIYHEKIHKRTTSVGETSKHSVRIQKPQKIWQMKEQKSKQTGSRHPQKSSFLQ
PDSN
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgtcgtcctcgtcgccggcgatggcgtcgcagcatgcgccgacgccgcgggag
ctcgacctcgacgctttcctcccgacgtctccgacctcctccgcgtcctccgacgccgac
gcagccgaccccgaccaccgccgcgccgtcgacgacctgctccgcctcctctcctcctca
gactccgactccgactccgaggagtccagccgcatccccagcagcaccagcagcggggcg
ccgtcccgtgtccaagccccggcgcctcccgctgagccctcgccgttgccgtccccgccc
ccgcccccgcccccgaggagatccgcatcggcctcgccgtcggagaccctctcctccctc
gtcgcgagaaccttctcgagcaacggcgcttcctcgtcgtcgaggcccctcccctcgctc
ttccggggcgtccgccccagccccaagcccggcgccgcacttgccgctgccgccgcagcg
tcccgcgcggtcctcaccccacacgccgctgccatcaagtcccgccgatcagtctcggcg
cccgtggagaaagttctggtggaagaggggagtggctccgaagactccaaggagctccct
cccactgggagcttggaagcagaggtagaagagaagggtaattcggaagcggttgctgag
gcgaccaagcaaactgcagatgggagtgtgggtacagaattgggagaggataaacaggca
gaagcgggaggtgaagagaatgctgaggctataaagctggtggaggcaagttctctggac
tctcttgttggagaggaatccagtgggcatgagcaaggtgatgatgtcaatttggcggaa
actgaccaagttgtgaatcaaattgaggctgtctatgaggaaaatggggatggcgaaact
gtagatgataatcatgtgcaatcagatcagggtatggatctaattggggttgtttccgag
gaaagttctgatgatgaacaggaatttgaaagatctgacagtatcatggaagaacaagtg
gaatctgggagcttaattgataaagtgattgaagagagggtagagcagctggaggccagc
aggaaggccgagaagaacgcagagaagaagctgaaggtgtcaatgaagccgttggagtgg
gcagaggagcttgagaagaggcaggcctcgtttggtcaacactgggaggaaggagcagct
gcgcagcccatgcaactagagggaatcggaaagggcccaccagctatcggttacatgcaa
attgagatggacaacccagtaactcgtgccatgtcctcaccatcgtttaggtcagaccat
ggatctccccaggtgctggctgttcataagagctatatagcaatgggcacatctaaaggt
gctgtcattgtcattccaagcaaatactccattcatcaagctgatgatacagatgcaaag
atgctgttcttatggaaccaaggcgagagaactcgatcaccagtgactgccatgtgcttt
aaccaacaaggggatcttctgctagtaggatatggtgatggtcatatgacaatttgggat
gtacagaaatctgcagcagcaaaagttatatatggcgagcatacagcaccagtagtgcat
gcttgttttatccgccaatctaaagccatcactggggattcaaagggggtagttctattg
cacacgttttccattatccccgtaattaatcgtttgactgtcaagggaactcagcgcctt
tttgatgggaatactggaattgtgctctcagcctgtcctcttgttatggatgaatctttt
ggttttagtaactcatctgcccagggaaatcagacaacttcctccagtggtggtcttggc
agcatgatgggtggtgttgttggaggtgtggttggagtagattctggatggaagtttttc
aatgaaggctcttctccaatggaggatggtgttgtagtcatgtttattatgcatcaacat
gctcttgtggttagactccgtaccaatattgaccatgttgaccatattgagaccttctct
agaccagatggagcacgtgagggctccattgcgtatgctgcgtggaaatacacatcatct
ttgaatgaatcgtcatcagtagatgaagaacgagtgtcatggctagcacttgcatgggac
cgtcaagtgcaagttgcaaagtttgttaaatctaagatatttaaacacaaggagtggaag
cttgatagtgcagctgttggtgttgcctggttggatgaccagatgttagtcgtccttaat
ttgagagggcagctctgtttattctctaaagacggcagtgagcttcgcagaactaccttt
gttcctgatggccttctttttgatgacacaatattgcaccatgcacatttttttaacagg
tttggtaacccagagaggcattttaacagttcagtagcagtaagaggtgctacagtgtat
attcttgggccatcttttctcacggtttcccgacttcttccatggaaagagcgaattgaa
gcactaaagagggctggcgattggatgggtgcactagacatggcaatgaggctttatgat
ggtcaaacacagggtgttgttgatctcccaagaacggttgattcgattagagaggccata
atgccttacctagtagaattgctgctatcgtatataagttatgtttttgaatatatttca
attgcactgtcaaatcatactggaaaagggggagaatcagatgttctaatagaggcagat
cgatccctgcttacacaaagagatgagcagtacgctcgtgtaggaggggttgcagttgag
tattgtgtccacattggacgtaatgatatccttttcgatacagtcttctctaagtttgtt
gctgcacaaagtggaggtatgtttctggaggtgctagagccttatatattgaaggatatg
cttggttctctgccccctgagatcatgcaagcactagtggagcattatagtggcaaagga
tggttgcagcgagttgaacaatgcatccttcacatggatatttcttcattggactttaat
caggtagtcagactttgtcgtgaacacgggctatacggtgcactaatttatttatttaac
caaggcctaaatgatttccatacacctctagaggaacttctatcagtagttcagaacacc
aacagtaaagatgatacttctagtggatacaggatgcttgtttatctgaaatattgcttt
cagggcttggcatttcctccagggcatgggataattccccgatcccggcttcattcagtg
agggaagaactcctgcaatttctgcttgaagagtctaagccactcacttctgaagtattt
aagggtttcaatgcttcttgtggaaagtgcctaaacatatgctatctgctatggatggat
actgaagctactttggaagtcctcaaatgtgcttttgtacaagataactttgaacctaga
gatgaacttccaagtactgtccatacatctgtcttaggcaatgaagatagtattgacgct
ggaaacccagagagccaaaatactatggtacaaaatgtagttgatgccatcattgacatt
gttggtttgaaaaatgatgtgattcggtccgttgtcatgggtaacactgaatcagaagtt
tggccttcggagaaggattttagctatttaatggagtttgtgtccttttttgtttcccac
aaaagggctaatgcatccaagagagttgttaggcacattcttacttatctcatttcatca
tatgatgacacaagaacaaggactcagaaagaaaaagaagttcttcaactcttcaatgcg
gttccccaaaatgattggaattcagattttgtcttgaacctttgttcagatgctcatttc
tatcaggcctgtggcttgatatttactactaggaatcagaatttggctgctttagatagt
tacatgaaggatgaagaggaacctttccatgcttttatcttcattgataaaaagttacta
gaattggttgatgatgaagctttgtcatttcatatcactgtaatatctcgctttcctgag
ctagtcaagctaagcagggagtgtgcatttgtcttggccagtgatcatttctgtgataag
atacagcaaatattagcagagcttcgttctgacagacacagcctctttcttttcttgaaa
actgctattgaagtacacttgtctagaaaacttgacctcagtaagcttgaagcaagaaac
aaacaaactgttgaactccagtactcttctactgatgttgaagattatcagcagaggcta
tcaaatctctccaagttatgccacaatcctgtttacatcgacgacgagttagttgaactc
tatctggagcttttatgtcagtatgagcgaaggtctgttctgaagtttctggagactttt
gacagttacagattggagcggtgcttgcatctttgcctagattatggagttacagatgct
gctgcattcttgcaagagagggttggtgatgttgggagtgccttagaccttattctggct
ggacttgatgagaaaattagcctatttatctcttctgtggaaaatactttctctggtgtc
gcatcaaaaagtatctctgaaattaagcaactagacattgttctagaaatgagtgaggct
catccagtgcttgatgcattgcatgcctccattggattgtgccaaaggaattcacagcgc
ttggacccagaggaatctcagtccctttggttccaattgcttgactccttctcagagcca
ttaaaaaaattgtatggaatcaaggatgttaatggaaaaggtgccaggtcaaattggagt
gaagcaccaatggaacatctgaaggaaaaaggactatctcaacaaatgaggatttcaact
aaacaaaagtgcctaaatgttctgcgaaaagtattttcacaatgtgttggagaaacaata
gaggccatggctgggtatatacccctaccagcaatcatggcaaaactgttatccgataat
gggagtcaagagtttggtgatttcaaacttgtgatacacagaatgttatctatgtatctt
tacgaaaaaagaatactggaaacagctaagtcagtaattgaggatgactcattttatacc
ttgagcttattaaagagaggagtttgtcatgggtttgctccacagacttttgtatgctgc
atatgcaactgctcactttctaaagaaggtgctatttcagccgtacggttgttcagttgt
gggcatgcaacacatcttcagtgtgagtctgagcagaccaggtcatccaatcgggaatcc
aaagagggatgccctgtctgtctctcgacgagtgatacacaagctcgaagcaaatcacct
atgtttgagaatgggctaatgaagtattctggggctgaacatgaattgtcacatgacatc
catcagattcatgaagttgatcatgctgagagatctcgtgggcttcaacagatgtcacgg
tatgaaatactgaataatcttcagaaagcgcagaagtcctttcatatagaaaccgtacct
ccattgaaacttgcaccgccagctatatatcatgagaagatacacaagaggaccacttca
gttggtgaaactagcaaacattcagttagaattcagaaaccccagaaaatatggcaaatg
aaggagcaaaaatcaaaacagactgggagtcgtcatccacaaaagtcaagttttctacaa
ccagattcaaactga
DBGET
integrated database retrieval system
