Miscanthus floridulus: 136466954
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Entry
136466954 CDS
T10264
Name
(RefSeq) ubiquitin C-terminal hydrolase 15-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mflo01002
]
136466954
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136466954
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
136466954
Peptidases and inhibitors [BR:
mflo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
136466954
Ubiquitin system [BR:
mflo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
136466954
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
136466954
NCBI-ProteinID:
XP_066321589
LinkDB
All DBs
Position
7:complement(46639238..46650142)
Genome browser
AA seq
961 aa
AA seq
DB search
MLQPREADVPALFLVFIVLPVVAYFLLGRWHDAASKKARVSVLAQQAAEEAYREETMACP
DIIPPGPSLRTMPYFRPAPSLRQEYHECATCHAPAKTRCSRCKSVRYCSGKCQIVHWRQE
HKETCQKWLGSGSSSFGGSSTEATEQMPFLTNLNSPLPGGDIHLRDMNFDTLSEPSFPTT
DGYNLDTDPFPADRSNMNISNQGIHMSENGAVGVSFEKNNYNAADEIHSPEILSGNKVSN
NYFGSDAMSGNGDATYPAKSNAQLPSSCAPDMRKQSKASITVYQPDMGVYLTSDMVNSCE
GSYASASEPLQRSLSSGRTIGKANVVNKRPPYPSSKVVSAQKSQDRMSTSYQNDGHEKNL
CNKNDQRSTPTCESSQSTSSNLQKFGASKVEVLKKPSKFFKTSLVGLINDNKRNKVLFPY
EDLVKFFQYEARGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCSSKNWC
LMCELEQYASTLRESGGPLSPSRILSNLRNIGCRLGGGTQEDAHEFLRHLVMSMQAACLD
GLGGEKHVEPSLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQ
DALTQFTAPEDLDGDNMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQSGKYGKINKC
VTFPDMLDMVPFVTGSGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDS
EVQVVSVNQVMSEGAYMLFYLRSFPRPPRIYIEKGMPVTSVKRHTSKSSKGSKHERKQTE
LLFSANDQAYGVYDFRPDGEGYTQDHHAELRSRDFHHADDFSEATSSEWSLFTSSDESSF
TTESTRDSFSVVDYGDNAGLDPISSIFGPSYAPEHPPGNFVSCTRFSPSNPQTRYFSEST
GFVSDSSMPAHPSGIVHRGRYPDRACASSAEPLASAHQRSGYGRYPLSRDGFVQTSGFCQ
M
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgctccaaccaagggaagctgatgtgcctgcactctttcttgtcttcattgttcttccc
gtggtagcttattttcttcttgggagatggcatgacgctgcaagtaagaaggcaagggta
agtgtgcttgcacagcaagctgcagaagaagcctatagagaggaaacaatggcgtgccca
gacattattccgccagggccttccttgagaactatgccctatttcagacctgcgccttca
ttaagacaggaataccatgaatgtgcaacttgccatgcccctgcaaagactcgttgctcc
agatgcaagtctgttagatactgctctgggaagtgtcaaatagtacactggaggcaagaa
cataaggaaacatgccaaaaatggcttggtagtggttctagcagctttggtggatcaagt
actgaggctactgaacagatgccgttcttgactaacttaaattcacctcttccgggtggt
gacattcacttgcgtgacatgaacttcgatactttatcagaaccatcctttcccacaact
gatggttacaatctagatactgatccatttccggctgacagaagcaacatgaatatatca
aatcaaggtattcatatgagcgaaaatggtgctgttggtgtatcttttgaaaagaataat
tataatgctgctgatgaaatccactctccggagattttatctggaaacaaggtgtcaaac
aactattttggttcagatgcaatgagtggtaatggggatgcaacttatcctgccaaaagt
aacgcacagctacctagcagttgtgctcctgacatgagaaaacagtcaaaagcaagcatc
acagtttatcagcctgacatgggtgtttatttaacttctgacatggtcaattcttgtgag
gggtcatatgcttcagctagtgagccactgcaaaggagcttgtcatctggaagaactatt
gggaaagcaaatgtggtgaataagaggcctccatacccatcaagtaaggtggtttcagca
caaaagtcacaggataggatgtctacatcatatcaaaatgatggccacgagaagaatctt
tgcaacaaaaatgaccaaagatctacccccacatgtgaatcaagtcaatcaacaagcagc
aatctacaaaagtttggagcatccaaggttgaagttttaaagaagccttcaaaatttttc
aaaaccagccttgtgggattgattaatgataataagaggaacaaggtattgttcccatat
gaagatcttgtcaagttttttcagtatgaagcacggggtatttcccctcgaggtcttttc
aattgcggaaacagctgctatgctaatgctgttcttcaatgtctcatgtgcacaaagcca
ctgatgatctaccttcttctgagattgcattctaaagattgttcttcaaaaaattggtgc
cttatgtgtgaacttgagcaatatgcttcaactttacgtgaaagtggtggacccttatct
ccaagtagaattctttctaatctgaggaatattggatgtcgcttgggtggtggaactcag
gaagatgctcatgagtttttaaggcatcttgtgatgtctatgcaagcagcttgcttggat
gggctgggtggtgagaagcatgttgaaccaagtttgcaggaaacaacactgatacaacag
atgtttggtggccgtcttaaatccaaggttaagtgcctcagatgctatcacgagtctgaa
agatatgagaatataatggatcttactttggagattcatggctgggtagagtccttgcaa
gatgctttgacacagttcactgctcctgaagatttagatggtgataatatgtataaatgt
ggaaggtgttctgcctatgttaaagctaggaagcaactgagcgtgcatgaggtgccaaac
atattaacagttgtccttaaaagatttcagtcaggaaaatatggcaagatcaacaaatgt
gttactttccctgatatgttggacatggttcctttcgtgactgggtctggtgacaatccc
cctctttatttcttgtatgccgtggttgtacatgtggatacagaaaatgcatcattctct
gggcactatatatcatacgtcaaagatatgcagggtacatggttgagaattgatgattca
gaggtccaggttgtatcagtgaatcaagttatgtcagaaggtgcatatatgcttttctac
ttgaggtcttttccccgaccaccaagaatatacattgagaaggggatgcctgttacatct
gtaaagcgtcacacgtcaaaatcttccaagggctctaaacatgagcgcaagcagacagag
ttactcttttctgcaaatgatcaagcatatggtgtttatgattttagaccggatggcgaa
ggctacacgcaagatcatcatgcagagttgagatccagagatttccatcatgccgatgat
ttctcggaagctacatcaagtgaatggtcgctgtttaccagctctgatgagtcctcattt
accaccgagagcacaagagattcattcagtgttgtggactatggagacaacgctggcctg
gatccaatttcctctatatttgggccaagttatgctccggagcatcctcctggcaatttc
gtctcatgtacaaggttctcaccttccaatccacaaacaaggtacttctcagagagcaca
ggctttgtctcggactcttccatgccggctcaccctagcggcattgtacatagaggaagg
tatccagatagggcatgtgcctcttcagccgaaccgcttgcttcggcgcatcagcggagt
gggtacggtcggtatccccttagtcgagatggttttgttcaaacatctgggttttgccaa
atgtaa
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