KEGG   Miscanthus floridulus: 136467149
Entry
136467149         CDS       T10264                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 16-like isoform X1
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
mflo  Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mflo03041]
    136467149
Spliceosome [BR:mflo03041]
 Complex A
  U2 snRNP components
   U2 related factors
    136467149
 Complex B
    136467149
SSDB
Motif
Pfam: zf-CCCH RRM_1 Vif zf_CCCH_4 zf-CCCH_4
Other DBs
NCBI-GeneID: 136467149
NCBI-ProteinID: XP_066321831
LinkDB
Position
7:complement(80189987..80195851)
AA seq 779 aa
MSSALAAGGGAAAAAGAPEAATAPTRREKRRERKKERRRRARRQAAARARAAAEAEAPAA
DPEEERRLLEIQEAEAAEESERARRAFEDAERRWLEAAAARAAEKAAAAAAEEEARAAEA
SARKEPKDDQGNQSEEDSEWEYVEDGPAEIIWKGNEIIVKKKKVKVPKGSKETLPVQEED
RPTSNPLPPQSVAFAAQRREPSLSAQEVLDKVAQETPNFGTEQDKAHCPFHLKTGACRFG
VRCSRVHFYPDKSSTLLMKNMYNGPGLALEQDEGLEIVCSFVLSSELRLEAYSDQFTDEE
IEQSYEEFYEDVHTEFLKFGELANFKVCRNGSFHLRGNVYVHYKSLDSALLAYSSMNGRY
FAGKQITCEFVAVTRWRAAICGDYMRSRYKTCSHGAACNFIHCFHNPGGDYEWADWDNPP
PRYWIRKMTALFGPSVDTMYEKESDTPNFKSSEGSDRKKLKISSDRYVSRGSRDEDVHTR
HSQDYSHSKQERSSHSMDYEYKRHRRDSSAVDKRRRQDVEDTNGRQFSPMGNGSESHRHK
HEERHRSDHVINGEKKDEKTRPRKHCSDRHGSLEPGYSDWPSDFTDTDIRKGPSGEKSTS
RYEYDDAKRSRRGSSEYYNLERHHSTGKKPTGKEHNTKRRSRRDIEDYYHDEKDGGRGKS
RKHDHHDSNDRWVATNSDVDSDVDRYQSSSCKGTRLGRKDDAHPDSEARHQRSSRSTKDD
RRRKCHSGNRRHSGTEEGTQESGSGDLSSDSWSRRLRSSEENFSAHRSKRKRSVGKKSS
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgtcgtcggccttagccgcgggcggtggcgccgccgccgccgccggtgccccggaggcg
gcaacggcgccgacaaggagggagaagcggagggagcggaagaaggagcgccgccggagg
gcgcggaggcaggctgcggcgcgcgcgcgcgctgcggccgaggcggaggcgcccgcggcc
gaccccgaggaggagcgccgcctcctcgagatccaggaggccgaggcggctgaggagtcc
gagcgtgcgcgccgcgccttcgaggacgccgagcgccggtggctcgaggccgccgccgcc
cgcgccgcagagaaggctgcggctgctgcggcggaagaggaggccagggccgcagaggct
tccgctcggaaggagcctaaagatgaccaagggaaccagtcagaagaagatagtgaatgg
gaatatgttgaagatggtccagcagaaattatatggaaaggaaatgagatcattgtgaag
aagaaaaaggttaaagtaccaaaggggtccaaggaaacactgccagttcaagaggaagat
agacctacatcaaatccgctcccaccacagtctgttgcttttgctgctcagaggagagaa
ccttctttgtctgctcaagaagtacttgacaaagttgctcaagagacaccgaattttgga
acagagcaggataaggcccattgtccatttcacctcaagacaggggcttgtcgctttgga
gtgcgctgcagcagggttcatttttaccctgataaatcaagcacattactaatgaaaaac
atgtataacggtccaggccttgctttggagcaagatgaagggcttgagattgtatgttct
ttcgtgttatcttcagaacttcgacttgaggcatacagtgatcagttcacagatgaagag
attgaacaaagctatgaagaattttatgaagatgtacatacagaatttctgaaatttggt
gaacttgcgaacttcaaggtatgtagaaatggatctttccatcttcgaggaaatgtttat
gtgcactataaatcgttggattcagctcttcttgcctacagcagcatgaatggacgctat
tttgctggaaagcagataacatgtgaatttgttgctgtgacaagatggagggctgccata
tgcggtgactacatgaggtcaagatacaagacatgttcacatggagctgcgtgtaatttt
attcactgctttcacaatcctggaggagattatgagtgggctgattgggacaatcctcct
cctagatactggattaggaagatgactgctctttttggtccctcagttgatactatgtat
gaaaaggagagtgatacccccaattttaaaagttcagagggctctgataggaagaaactg
aaaatttccagcgatagatatgtttcaagaggatctagggacgaagatgtgcatacacga
cactctcaagattattcacactctaagcaagaacgtagtagccacagcatggattatgag
tacaaacgacatagaagagattcttcagcagtagataagcgccgaaggcaagatgttgaa
gatacaaatggcaggcaattttcacccatgggaaatggcagtgagtcccataggcacaag
catgaagaaaggcatagaagtgatcatgttattaatggagagaaaaaagatgaaaaaact
aggcctaggaagcactgttctgataggcatggaagtttggagcctggatattctgattgg
ccttcagacttcactgatacagacatcaggaagggtccttcaggtgagaagtccactagc
aggtacgagtatgatgatgccaaaaggagcaggaggggatcgtcggagtactacaatctt
gaaagacaccactctacaggtaaaaaaccaacaggaaaggagcacaacactaaaagacgc
tcgagacgtgacattgaagattattatcatgatgagaaagatggcggaagagggaaatct
cgaaagcatgatcaccatgactcgaatgatcgttgggtagccacaaatagcgatgttgat
tcggatgtagatagatatcagagttcaagctgtaaaggcactaggttgggaaggaaggat
gatgctcatccagacagtgaagctcggcatcagaggtcaagtagaagtacaaaggatgac
aggagaaggaagtgtcacagtggaaacaggcggcacagtggtactgaagagggtacccaa
gaatcaggcagtggagatttgagctctgattcatggagccggagattgagaagcagtgag
gagaacttttcagcacacaggtcaaagaggaagcgaagtgtgggcaagaagtctagttag

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