Miscanthus floridulus: 136467335
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Entry
136467335 CDS
T10264
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
mflo Miscanthus floridulus
Pathway
mflo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136467335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136467335
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
136467335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
RAP1
Motif
Other DBs
NCBI-GeneID:
136467335
NCBI-ProteinID:
XP_066322091
LinkDB
All DBs
Position
1:174159159..174168815
Genome browser
AA seq
497 aa
AA seq
DB search
MGNHLFRFGEDPAVFQRTLKIKTVHTAQEFDVRVDTSAEKEKTHSIDRFTTGFPPFSKGR
SAENRWTLRKDVPQGRQLTGTGNMRDRHYSKRSWVLEDETGEHQYQGQTEDPPATYYSLT
LKGNDMIAVQVGPWYNFSKIAQYKQLTLEEAEEKMNRRRSSASGCERWMMKAAANGAAAF
SSGVKRLDDVNIGATNGVHPMKGDRNENGNQSDKVDDEEGGAARKNRLGLTMKGMDEDDE
EGGKDIDFDLDDEIEKGDDWEHEETFTDDDESVDVDIEERPDLADPEAAPPEIKQDDNEN
ELGGSDNLSKSGQELKKLLRRAAGENESDVDDKSTDEDDLPSPELASKQLVPKSEPVDSN
PAKPTPSAHTQSATPSSKSNQKRKSGGGDANTSNGATSKKIKIEPETRTLVVKDEKLYSS
EPISKSSLAERRESSPITEEEVRAVLRAIEPTTCQDLVLRFKARLITQEDKKTFSDIVRK
ISHKNCHGKVVLQKEQK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaccatctcttccggttcggagaggacccagctgtgttccaaaggaccctgaaa
ataaaaacagtccatactgcgcaggagttcgatgtccgggtggatacctccgcggagaag
gagaagacccactccatcgacaggttcaccaccggctttccgcccttctcgaaggggagg
agcgcagagaacaggtggactcttcgcaaggatgttccccaaggacggcagcttactggg
actgggaatatgcgggacagacactacagcaagaggtcgtgggttttggaggatgagacg
ggtgaacatcagtatcagggccaaactgaggatccgcctgccacatactattcactgaca
ctgaaaggcaatgacatgattgctgttcaagttggtccctggtacaacttcagtaaaatt
gcacagtacaaacagctgaccttggaagaagctgaagagaaaatgaatagaaggagaagt
agtgcatctgggtgtgaacggtggatgatgaaggcagctgcaaatggagctgctgccttt
agttcaggtgtgaagaggcttgatgatgtaaatataggggcaacaaatggtgttcacccc
atgaagggagataggaatgagaatggaaatcaatctgacaaagttgacgacgaagaaggg
ggagctgcaaggaaaaacaggcttgggcttactatgaagggcatggacgaggatgacgag
gaaggtggaaaggacatagacttcgatttggatgatgaaattgagaaaggtgacgattgg
gagcacgaagagaccttcactgatgatgatgagtctgtggatgttgatatagaggaaaga
cctgacttagctgatcctgaggctgctcctcctgaaattaaacaggatgacaacgagaat
gaactaggcggcagtgacaacttgagcaagtctggtcaggagctaaaaaagctgcttcgt
cgagctgctggggaaaatgagtctgacgttgacgacaaaagcacagatgaagatgaccta
ccatcgccagaacttgcttcaaaacaacttgtacccaaaagtgaaccagtggatagcaac
cctgctaaaccaacaccatcagcgcacactcagagcgccacaccttcatccaaatccaat
caaaagaggaaatcagggggtggtgatgcaaatacttctaatggtgcaacctccaaaaag
ataaagatagaacctgaaaccagaacattggttgtcaaggatgaaaagttgtattcttcg
gaaccaatatcaaaatcatctcttgcagaaagaagagaatcctcacccattacagaggag
gaagtcagggcagtacttcgtgcaattgaaccgaccacatgccaagatctggtgttgagg
ttcaaggctcgtctaataactcaagaggacaagaaaacattttcagacattgtgaggaaa
atatctcacaagaattgccatggcaaagtcgttcttcagaaggaacaaaagtga
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