Miscanthus floridulus: 136467394
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Entry
136467394 CDS
T10264
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mflo01009
]
136467394
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136467394
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
136467394
Protein phosphatases and associated proteins [BR:
mflo01009
]
HAD phosphatases
Fcp/Scp phosphatases
136467394
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
136467394
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
136467394
NCBI-ProteinID:
XP_066322177
LinkDB
All DBs
Position
7:98069628..98079310
Genome browser
AA seq
937 aa
AA seq
DB search
MFKSMVYYGNTSIGEVEVWPKGEASAGLAVAAWAREIRVDRLSRPSERCPPLAVMHTVAV
GARCLVMESRPPVAADVAPMPLVAMHAACLRDNKTAVVPLGDGELHLVAMTSRRNLTNHA
CFWGYKLPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTSRSFEDRIDGLQRKLSNETDP
QRRNGMLSEIKRYQDDKSVLKQYIEGDQVYDDGEVYKAQPEIVPPLSDNQQPMTRPVIRL
QDKNIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWR
LLDPDSRLINSVQLHDRMVCVKSGLKKSLLNVFHDGSCHPGMALVIDDRLKVWDEKDQLR
VHVVPAFTPYYAPQAEANCSIPVLCVARNVACNVRGGFFKDFDEGLLPRISDVHYEDEVN
DISSAPDVGNYLITEDENAALVNGNGNRDSLPFDGMADAEVERRMKEANAQAFHQTAGNF
VMPVAPAQNFVSSSVAPLAPPLGMMPPPFSQPVVQPGFSDSLQGSPAREEGEVPESELDP
DTRRRLLILQHGQDTRDPTPPLPAIPPVQVPVPPVQPHGNWFPTEDGLNPSSLNRGSAGF
TVESDSMLYEKKQPPHPSFFHGGDSPMSSDRFGYQNQRFPSQLPHTEDHHMLQNHAPPKY
RSFSGEELAARHVPSSQRNNQIESGRHFAQYAGTSSGILEGIALKCGSKAEYRSTLCDTA
ELQFSIEVWIVGEKVGEGIGRTRREAQRQAAEMSLRNLANKYLSSDPNKLTDMKENGFSS
NRNVFGYSGNTRDDMLPFSSTSEESRFMKMEENNSRKTGGSVAALKELCTVEGYNLVFQE
RPSPADGLVGKESYAQVEVGGQILGKGVGLTWEEAKLQAADEALGTLRSMLGQLGHKRSG
SPRSLAPNFNKRFKPDFPRTVQRVPYGTYSRIEGHVP
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagtcgatggtttattacgggaacacctcaatcggagaagtggaggtgtggccc
aagggcgaggcgagcgcgggcctggccgtggcggcttgggcgcgagaaatccgcgttgac
cgcctttcccggcccagcgagcgctgccctccgctggcggtcatgcacaccgtggccgtc
ggcgcccgatgcctcgtcatggagtccaggccgcccgtcgccgccgacgtggcgccgatg
cctctcgtcgccatgcacgccgcttgcctcagggacaacaagaccgcggttgttccactt
ggagatggagaattgcatttagttgcgatgacatccagaagaaacttgacaaatcatgct
tgtttctggggctataaattgccatttggtttgtataattcttgcttgaccatgttaaat
cttcgatgcctgggtatcgtgtttgaccttgatgagacattgattgtcgccaatacatca
cggtcttttgaggacagaattgatggacttcaaagaaagctgagtaatgagactgatcca
cagcgtaggaatggtatgctatcagagatcaaaaggtaccaagatgataagtccgtccta
aagcaatatatagaaggtgatcaggtctatgatgatggagaagtgtataaagcacaacct
gagattgttccaccgttgtctgataaccagcaaccaatgacacgtccagttataagatta
caagataaaaacattatcctgacaagaataaatcctctgattagggataccagtgttctt
gtacgtttaaggccagcctgggaggatcttcgcagctacttaattgcaagaggtcgcaag
cgttttgaggtctatgtgtgtacgatggctgaaagagactatgctttagaaatgtggaga
ttgcttgatccagattcaagattgattaattctgttcaacttcatgatcggatggtgtgt
gtaaaatctggtttaaagaagtccttgctaaatgtcttccatgatggttcttgccatcct
ggtatggcattagtaattgatgatcgtctaaaagtttgggatgagaaggatcaattacga
gttcatgtggttcctgcatttactccatattatgctcctcaggcagaggcaaattgttct
atcccggttctgtgtgtagccagaaacgttgcatgcaatgttaggggtggtttcttcaaa
gacttcgatgaaggtctcttaccaaggattagcgatgttcactatgaggatgaagtaaat
gatatctcatctgcgccagatgttggcaattatttgataacagaggatgagaatgccgca
ttagtgaatgggaatggaaatagagattcattgccttttgatggtatggcagatgcagag
gttgagaggagaatgaaggaagccaatgctcaagcattccatcaaacagcggggaacttt
gtcatgccagtagcccctgctcagaattttgtttcatcttcagttgcaccattagctcca
cctcttggcatgatgccacctccattcagccagccagttgttcaaccaggtttttcagat
tcactgcaaggttctccagctagagaagagggcgaagttcctgagtctgagttggatccg
gacacaaggagaaggcttctcatattacagcatggtcaagacacaagagatcctacacct
ccactcccagcaataccaccagtgcaagttccagttcctccagtgcaacctcatgggaat
tggtttcccacagaggatgggctaaacccaagtagcctgaatagaggttcagcaggtttc
actgtagaatccgattctatgctctacgagaaaaaacaacctcctcatccttcattcttt
catggtggggatagtcctatgtcgtctgatagatttggctatcagaaccagaggtttccc
tctcagctaccacacaccgaggatcaccacatgcttcaaaaccatgcacctccaaaatac
agatccttttctggtgaggagctagcagctcggcatgttccctcaagccagagaaacaac
cagatagaatcaggaagacactttgcacaatatgctgggacctcttctggcatattagag
gggattgctctgaaatgtggatccaaggcggagtacaggtcaacattatgtgatactgca
gaactacaattctctattgaggtttggattgttggggaaaaggttggtgaaggaattggt
aggacaaggagagaagcacagcgtcaagctgcagaaatgtctttaagaaacttggccaat
aaatacttgtcatctgatccaaataagttgactgatatgaaagaaaatggtttcagtagc
aacagaaatgtctttggttactctggaaataccagggatgatatgttgcctttttcaagt
acttccgaggaatctcgctttatgaaaatggaggagaacaattccaggaaaacaggaggt
tctgttgctgctctcaaggaactttgcacggttgagggatataacttagtttttcaagag
cgtccatctccagcagatggtttagttgggaaagaatcttatgctcaggtagaagttggt
ggacaaattctaggcaaaggagttggattaacatgggaagaggccaagctccaggctgct
gatgaggcccttggaactttaagatccatgctaggtcaacttggtcataagcgatctggc
tctccaaggtcattggcaccaaattttaacaagcggttcaagccagattttccaaggacc
gtacaaagagttccttatggaacatattctaggatcgaaggtcatgttccttag
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