Miscanthus floridulus: 136467408
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Entry
136467408 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: protein SHORTAGE IN CHIASMATA 1 homolog
KO
K28108
shortage in chiasmata 1
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mflo03036
]
136467408
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Meiosis-specific proteins
Others
136467408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
ABC_membrane
Motif
Other DBs
NCBI-GeneID:
136467408
NCBI-ProteinID:
XP_066322191
LinkDB
All DBs
Position
7:complement(98831338..98839782)
Genome browser
AA seq
1717 aa
AA seq
DB search
MRSRFLTADYFAPSPSASSSSDLAIALASLPFPALPVPTLPPDPHLLNPFPFPADFLPDP
SVAGEDLDSLPFDSALTEFLAAFVPQPLSVPDIPAADEGLLDDYLYGRGVYGNGFSSMDP
VAFRIPKGLDDSHTKGDKEEGLSLEASAVTKRGGLLEAMFEVPEVDFLLVLQKKIASLDD
EEPDACVTYSFGVPDVKIHPDFIDIDTETRIPYPAELAESIYQVEVPVKHDDDMNCPYAK
DSSCMEIAGQENGQIIPQLEASMISWELDECPAKTAVSNIFHNIVEHLYDGAXVRLPSFG
STEFLRSCDMDIFSLVCKDAPRVEYQADKPITTKDVAEMDFVRINHDILLDKKSALYPLK
PDGTCSDFPCSILLEEVETINFPSEDAFKTLVQSVKAEMNTSEVIFKDDFDQAKXFYESV
VSSEWALVDDTFKSLPTPILPDDKAMRSMLPPIEVLCSLKPLPLSAADGIYLDWHLLSEG
PCNQESCSTYASMVEEVKPCSLSPEMEISCQQMPALDISFLEDFPRSAKLQHEDKKNEIY
VPGPIPDDPSANLETTQKNMLESDVRGHSHMDKLSPEKESSLFKSTSQSNELSFYLNVRN
DTNKVRKNEDISTLDTPSSKQAAPFSTRPRVNKLIEIHPVNLSDLIQGLIKDIHVSYTSV
LQESAYFRHSFSDRQGLSISKQKLLELITGEGSEGLYSYCKYEDKMELIVLYALKQVAYY
LCFFGLHAAYLYVGNLTGTFENIPERLRNIQRCIGEARLKAEKQLLESHPSLSVIETILR
SKTQIGRKIRKILIVSDRAFWLPLGQKLTAMKITSVEFETYHSTTYSDPVIKTNSKTCML
EELWKSDCILLDNKNIPASFPFSEFCMILEYGGPNKSSILLSRAPKLDGLPPLHFLYVTV
DGEGLPNALVEDNHTDQDLKSTLDAVLHTLQKDLQEKMNKMRIVDSLNFIPATNQQQHLQ
TNHLTADSSKKIPADVQLHNQGNLNEKNIVDPHNFVTAAEQLNTLNQITIANSQKFVPAV
EKSSSTSSVSANVIKAPQDNQSARVLPLSEKMDSTKAGIPGPEAVIVVNTGNHGKNMLFS
RRSSYQQILALERGGMQVVERDVDLPVDLILTAAVCLLWYDTRTSGSSELTISSDTSGIT
NFVEDIATYILMALSFCFCGCIMVFEVENHLLSAVLEASDSLYASAASLDMNLQLFFSQM
PKSTDQIILNCIQNAVSINQAPCPQIPESESLVESFVTAFPSVSPLSAYMILSSDTLLDF
LRWSHEQRTQAVENYRLPPQSISLFSALCKFSELGESKSVLTECSSVDSDISSALLQSAR
KKKRCATQDFSAAVSHPARPNPCTQLHGDCVENDNVLSPPKLRKFSHIDDMMPDLPEVFM
IDQRLNMGSEGVSCQPRKYDVDAVTGIHVIDDDFINELTPNFRTYNERASSMVDMXNFSM
QSKLGDKQPIRSSFRASMPSACITSSHPTFPSALEISNDPGNWDVSCGINQTWTDNVHGD
FATSSGRNDLGSRYHEPRQEIMQTPASSLPFLKQDFGCHGASEGSGWEMDYLRQMNENRK
ARQEQSRCNVSATXXNSRTRDGSRILSVPPIESFRYQRNTDTPFRDQSPSDIESFRHRRN
INTLLRDQSPSNEARRYEKGRGGTKAQSHRVRKDFKAQPSINHGKSIVPSIEPTWTPLDK
RARQKLTFATHGSEKQTKLVWRHQSSPCVGCGFPKRY
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgcggagccgcttcctcaccgccgactacttcgcgccgtcgccctcggcctcctcctcc
tccgacctagccatagcgctagcatccctgcccttccctgccctcccggtcccgactctt
cctcccgatccccacctcctcaacccattccccttccccgccgatttcctccccgacccg
agtgtggccggcgaggatctcgactcgctccccttcgattccgcgctcaccgaattcctc
gccgccttcgtcccgcagcccctgtctgtgccggatatccccgctgccgacgagggcttg
ctggatgattatctctacggtagaggtgtgtacgggaacggttttagctcgatggatccc
gttgctttcagaatccccaagggactggacgacagccacacaaagggcgataaggaagag
ggactcagtttggaggcctcagcagttaccaagcgagggggcctgttggaggccatgttt
gaggttccagaggtcgatttcctgttggttttgcagaagaaaattgcatcgcttgatgat
gaagagccagatgcttgtgtcacctattcatttggtgtcccagacgtgaaaatccatccg
gacttcattgatattgatactgagacaagaataccatatccagctgaacttgcagagtca
atttatcaagtagaagtccctgtaaaacatgatgatgatatgaactgtccttatgctaaa
gatagctcctgcatggaaatcgcaggacaagagaatggtcaaataataccccagttggag
gctagtatgatttcttgggagcttgatgagtgcccagcaaagacagcggtatccaatatt
tttcataatattgttgaacacttatatgatggagcataagttcgtcttccatcatttggc
tcaactgagttcttgagatcatgtgatatggacattttttccttggtttgcaaagatgcc
ccacgtgtggagtatcaagcagataaaccaattacaacaaaggatgtagcagaaatggat
tttgtgaggatcaatcatgatattttacttgataaaaagtcagcattataccctctcaaa
cctgatgggacctgttcagattttccttgctccattctcttggaggaagtagagactatc
aactttccttctgaggatgcctttaagacacttgttcagtcagtgaaagctgagatgaat
acatctgaggtaatattcaaagatgactttgatcaagcaaaantcttctatgaatcagtg
gttagctctgaatgggctctagttgatgataccttcaaatcactacctacacctatttta
cctgatgataaagcaatgagatctatgcttccccctatagaagtactttgctccctaaaa
ccacttccgctatctgcagcagatgggatctatttggattggcatcttttatcagaaggg
ccatgcaatcaggagagttgctctacttatgcgagtatggttgaggaggtaaagccttgc
agtttaagtcctgaaatggaaataagttgccagcagatgccagcgcttgacattagtttt
ctggaggattttccgagaagtgcaaagcttcaacatgaggacaagaagaatgagatttat
gttcctgggcctatacctgatgatccatcagccaatttggaaacaactcagaagaacatg
ctagaaagtgatgtcagaggtcatagccacatggataaattgagtccagaaaaggaatca
tcattgtttaagtcaacgtcacagtccaatgagctaagcttctacttaaatgtgagaaat
gacactaataaagtaaggaaaaatgaggatatttctaccttagacaccccctcttcaaaa
caagcagctcctttttcaaccagacctagagttaacaaactcatagaaattcatcctgtc
aacctctcagatcttatccaaggccttatcaaagacatccatgtaagttatacatctgtt
ttgcaagaaagtgcatacttcaggcattctttctccgataggcaaggtttaagcatttca
aagcaaaagcttcttgaactgataacaggggaaggttcagaaggcttgtatagctactgt
aaatatgaagataagatggagcttattgtactgtatgcattaaaacaggttgcatattac
ctatgtttctttggtctgcatgctgcctatctgtatgtaggcaatttgactggaacattt
gaaaatattcctgagaggttaagaaatattcaacgctgcattggtgaagctcggttgaaa
gctgagaagcaactactagagtctcatccgtcattatctgtcattgagacaatccttaga
tctaaaacccaaattggccgaaagatccgaaagatccttatagtgtctgatagagctttc
tggttgccattgggtcaaaagctaactgccatgaagataacatctgttgagtttgaaaca
taccattcaaccacttattcagatccggtgatcaagacaaactctaaaacgtgtatgctg
gaagaattatggaaatcagactgcattctgctagataacaagaacatcccagcttcattc
cctttcagtgagttttgcatgatactggaatatggaggtccaaataaatcatctatcttg
ttatctcgggctcccaaattagatggtttgccaccactgcatttcctctatgtcacagtg
gatggtgaaggccttccaaatgctcttgtcgaggacaatcacacagaccaggatctgaaa
tccacgttggatgctgttttgcatacacttcagaaagacttgcaagagaagatgaacaaa
atgcgtattgttgattcattaaactttataccggcaacaaatcaacagcaacatctgcag
accaatcatctcactgctgattcatcaaaaaagattccagcagatgttcaactgcacaat
cagggaaatctgaacgaaaagaatattgttgatccacacaactttgtgactgcagctgaa
cagctcaatacgttgaaccaaataaccattgccaattcacaaaaatttgtgcctgcagtt
gagaagagtagttcaacttcttctgtatctgcgaatgtgataaaagctccccaagacaac
caatctgctcgtgtccttcctctcagtgagaaaatggacagcacaaaagcaggaatacct
ggcccagaggcagtgattgttgtaaatactggaaatcatggaaagaatatgcttttctct
cgaagatcatcttatcaacagatactagctttggagagaggaggtatgcaggttgtagag
cgagatgttgatctgcctgtggacctaatacttaccgctgcagtttgtttactatggtat
gatacaagaacctctgggtccagtgaattaacaatatcatcagacacatctggtataaca
aattttgtagaggatattgctacctacattctgatggcacttagcttctgtttctgtggc
tgcataatggtcttcgaggttgaaaatcacttgctttctgctgtattggaggcatctgat
tctctatatgcttcagctgctagcctggacatgaacttgcagctattcttctcacaaatg
cccaaatcaacagatcaaatcattctcaattgcatccagaatgcggttagtataaatcaa
gctccttgtccacaaatacctgaatcagaaagtctggttgagtcatttgtcacggcattc
ccttcagttagtcctctgtctgcatacatgatactttcttctgacactcttctggatttc
ctcagatggtcacatgagcaacgcactcaggctgttgaaaattatcgtttgccgccacag
agcatttctctcttcagtgctttgtgcaaattcagtgagctaggtgaatcaaagtctgtt
ttgactgaatgctcttctgtagattcagatatcagtagtgcattgttgcagtctgcaagg
aaaaagaaaaggtgtgccacacaagacttttcagcagcagttagtcaccctgctcgccct
aatccttgtactcaattgcatggtgattgtgtagaaaatgacaatgtattatcaccacct
aagttacggaaattctctcacatagatgatatgatgcctgacctccctgaagtctttatg
attgatcaaaggttgaatatgggtagtgaaggtgtctcttgtcagccaagaaagtatgat
gtggatgctgtaactgggattcatgtaatagatgatgacttcatcaatgagctgactcca
aatttcagaacatacaatgaaagggctagcagtatggtggacatgnncaatttctctatg
caatccaaattgggtgataaacagccaatcagaagttcctttcgtgccagcatgccatca
gcctgtataacttccagtcatccaacatttccatccgcattggagatcagtaatgaccct
ggtaactgggacgtttcatgtggtataaatcaaacatggacagataatgtgcatggggat
ttcgccacaagttcaggtagaaatgatctgggcagcagatatcatgaaccaagacaggaa
ataatgcagactccagcatcttcacttccttttctgaaacaggattttggctgtcatgga
gcatcagaaggctcaggctgggaaatggattatctaaggcaaatgaatgaaaacagaaaa
gcacgccaagagcaatctagatgcaatgtttcagcaacatgataaaattcaagaacaagg
gatggctctagaattctgagtgttcctcctattgaatctttcagatatcaaagaaataca
gatactcctttcagggaccagagcccttcagatattgaatctttcagacatcgaagaaat
ataaacacccttttgagggaccagagcccttcaaatgaggctcgcaggtatgagaaaggc
aggggaggaactaaagcacagagccatagggtaagaaaggatttcaaggcacagcctagt
ataaatcatggaaagagcatagtgccatccatcgagccaacatggactcctcttgacaag
agagcaagacaaaaacttacatttgcaacacatgggagcgaaaaacaaaccaagctggtc
tggagacatcaaagcagcccctgtgttggatgtggcttccctaagaggtactag
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integrated database retrieval system
