Miscanthus floridulus: 136467496
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Entry
136467496 CDS
T10264
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136467496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mflo03036
]
136467496
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
136467496
SWR1 complex
136467496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
DBINO
Motif
Other DBs
NCBI-GeneID:
136467496
NCBI-ProteinID:
XP_066322314
LinkDB
All DBs
Position
7:107496575..107512102
Genome browser
AA seq
2031 aa
AA seq
DB search
MASKGPRSKLDHETRARRQKALEAPREPRRPKVHWDHVLAEMVWLAKEFDSERKWKLSMA
KKIAQRANKSIVDQATKGERKQKEEEHRMRKVALNISKDVKKFWIKIEKLVVYKHQLEVE
ERKKKALDKQLDFLLGQTERYSTMLAENLVDMPYSQNLENGTSQINQPSHQEEVAEENIN
AAIPDDLDNMEVDDDYESSLDEEPEDDEHTIDEDEAHITEAERNEELAALEAEADLPLDA
ILKMYTKTKVQYVSVSRESSPDSNDMLSSLGSKNLIVDSSNQANGCDHEPAHSSSDDGNS
SEEVDDDQSYAEFVKKSHGKSNGNISSINDQEDEDYIAAEEVKDDEATLSEEEELAKKED
PDHLEEIKLLQKESEIPLEELLARYRKDGCADHETAELENSPHFVEEVNTDMSLDDQSVN
ILEAKSDICVDHQSRDVLETEHKALQSEIDVVETEQEALQSEIASEPCAQQNFVEENNLT
DVKAVHGDKSDDVIADAAAAARLAQPTGNTFLTTKVRTKFPFLLKHSLREYQHIGLDWLV
AMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWC
PAFKILTYFGSAKERKQKRQGWMKPNYFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHL
IKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNP
ISGMVEGQDKVNKEVIDRLHNVLRPFILRRLKRDVEKQLPRKHEHVIYCRLSRRQRNLYE
DFIASSETQATLASGNYFGMISIIMQLRKVCNHPDLFEGRPIISSFDMAGINMQLSYSVC
MLLDKSPFSQVDLSDMNFVFTQNEFSMSSWEADEVISAFPSSITSRNCDLDIFCSNKDHE
GSNLTNIFEDIQKALQEERIKESRERAASIAWWNRVRCQKRPVYGTNTRHVLTVNHPVSD
ILDKRNNPLCHMDYSSSLADLVLPSVERFQKMLDIVESFTFAIPAARAPPPVCWCSKGKS
PVFIDPEYREKCMNKFSPTLSPIRSAIVRRQVYFPDRRLIQFDCGKLQELAILLRRLKSE
GHRALIFTQMTKMLDVLEEFINLYGYTYLRLDGSTPPEERQTLMQRFNTNPKFFLFILST
RSGGVGVNLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILK
KANQKRALDDLVIQRGSYNTEFFKKLDPMEFFSGHTSLHAEDQEKNCSTTAGASNDVDLA
LSNADVEAAIRQAEDEADYMALKKLEEEEAVDNQEFSEEVAGRPEEDELVNEEDGKPDEH
INEEHKYNSSDVEKEKHITLSTKRLSDEKALTLAGDEDTDMLADVKQMAAAAAAAGQASS
SFENQLRPIDRYAMRFMELWDPVIDKAAVNHQVNVEEEEWELDRIEKLKEDLEAEIDEDQ
EPLSYESWDVDFATTAYRQHVEALAQKQLLEEQERQAQEAAKELEEKNDNMSSHRRKSKK
NKKKTGKFKSLKRVRLSSESEVVLEETSVDTMSIDDNAPSLELISDESPHHYSNKRKKIM
SATEEDSNSRSLKKFKKTTKSSFVSEALSPRLKEDLNDLDPKSMARTKSDGRISIPCMPV
KRVIVIKPERLKRKGIWSRDCASDSWTSEEDAVLCGTVHEYGPLWELASDFLHSLPGGSY
RGRYHHPVHCCERYRELFCKHAISATDNSNSEKVPSGTGKAILRVSEDQAQMLVNVTSEL
PNNELLLQKHFMAVISSVWRSKCRRDPCCFTNTYSSASHMFSPVKKPGGSSENWPMVNFR
PSFNLVRKALADAQAKSTLMVIPPPSRNQEYWRNYLELELDFLKDQHAYEEDFPSVINVS
ILEPEPSKQAPEPVEQSLLSGLSCRQAENRLRMASEACYDGDSSHWASSAFHINDATRHK
SGSKSIGKHKAASESGRPTKSKVQKITESHQEGPTVMSNFLHMPAQLLPSTADFHISDSL
SEFGISDSEFYFSEDLLQEVDDLEFFPDQGDSGLLPGIEELEPLSDFTDIG
NT seq
6096 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaaaggtccccggtcaaagctagaccatgagacaagagctaggcgtcaaaag
gctcttgaagctccaagggagcctcgacggccaaaagttcactgggaccatgtccttgct
gagatggtgtggctggcaaaggagtttgattccgagagaaaatggaagttgtccatggcc
aaaaagattgctcaaagagcaaataagagcatagttgaccaagcaacaaagggcgagaga
aaacagaaggaggaagaacatagaatgcgaaaagttgcccttaatatttcaaaggatgtg
aagaagttctggattaaaatagaaaagctggttgtttataagcatcaactggaggttgag
gagagaaagaagaaggcacttgataagcaacttgatttccttttaggtcagactgaaagg
tattcgacaatgttggcggaaaaccttgtggacatgccctattcccaaaacctagaaaac
gggacttcgcagataaaccaaccatcccatcaagaagaagtagcagaagagaacataaat
gcagccattcctgatgatcttgataatatggaagtcgatgatgattatgagagctccttg
gatgaagagccagaagatgatgagcacacaatcgatgaggatgaagctcatatcaccgaa
gctgagcggaatgaagaactagctgctttagaggcagaagctgacctaccactggatgct
attctcaagatgtataccaaaaccaaagttcaatatgtctcagttagcagggaaagcagt
ccagacagcaatgacatgttaagtagcttaggttcgaagaatttgattgtagattcttcg
aaccaggctaatggctgtgatcatgaacctgctcactcttcaagtgacgatggcaattct
tctgaggaagtggatgatgatcaatcttatgctgagtttgtgaagaaaagtcatggtaaa
agtaacggaaatatttcttctatcaatgatcaggaggacgaagattacattgctgctgaa
gaagtaaaggatgacgaagcaactttgtctgaagaggaagaattggcaaagaaagaagat
cctgatcatctggaagagattaagttactgcagaaggagagtgagataccactagaagaa
cttctcgcgaggtaccgaaaggatggctgtgcagatcatgaaacagcggagttggagaat
tcaccccattttgttgaagaggtcaatactgacatgtctttggatgatcaatctgtgaac
attttggaagcgaaaagtgatatatgtgtggatcaccaatccagggatgtgctggaaact
gagcacaaggctctacaatcagaaatcgatgtggtggaaactgagcaggaggctctacaa
tcagaaattgcatcagagccttgtgctcaacaaaattttgtggaagagaataatctcact
gatgttaaggcagtccatggagataagagtgatgatgtaattgctgatgctgcagctgct
gcaagattagcacaaccaactggcaacaccttcttgactacaaaagtgcgcacgaaattc
ccattccttcttaagcattctcttcgtgaataccagcatatagggctggattggttggtt
gctatgtatgagaagaggcttaatggaattctagcagacgaaatgggtttaggcaagaca
atcatgactatctccttgcttgcacaccttgcgtgtgagaaggggatatggggtcctcat
cttattgtcgtgccgactagtgttatgctaaattgggagactgaatttcttaagtggtgt
cctgcttttaaaatactgacttatttcggaagtgcaaaggagagaaagcagaaacgtcag
ggctggatgaaaccaaattacttccatgtttgcatcacaacatataggcttgtcattcag
gactctaaagtgtttaagcgaaaaaagtggaagtatcttattcttgatgaggctcatctg
ataaagaactggaaatcacagcgttggcagactttgctcaactttaattcaaagagacgt
attcttctgactggaactccactgcaaaatgaccttatggaactttggtccctcatgcat
tttctgatgcctcatgtatttcagtctcatcaagagttcaaggattggttctgcaatcca
atttctgggatggtggaaggccaagataaagtaaacaaagaagttatagatcgattgcac
aatgtccttcgtccatttatactgcgccgactgaaaagggatgttgagaaacagttacca
aggaagcatgagcatgtcatatattgccgactttctagaaggcaaaggaacttgtatgaa
gattttatcgctagctcagagacacaagcaacactggcaagtgggaattattttggcatg
ataagcatcattatgcaacttagaaaggtctgtaaccatccagatctttttgaaggtcgc
ccaataataagctcatttgatatggctgggattaacatgcagctcagctattcagtctgc
atgctccttgataagagtccattttctcaggtggacctgtctgatatgaattttgtgttt
actcaaaatgaatttagcatgagttcctgggaagctgacgaggtcatctctgcctttcct
tcaagtatcacctccaggaattgtgacttggatattttttgctctaataaggatcatgag
ggaagtaatttgacaaacatttttgaagatattcagaaagccctacaggaggagagaata
aaggaatccagagaaagggcagcttccattgcatggtggaatagggttagatgccaaaag
aggcctgtctatggcacaaacacgagacatgttttgactgtaaatcatcctgtatcagat
attcttgataagaggaacaaccctttgtgccacatggactattcatcaagccttgcagat
cttgttcttccatctgtggaacgctttcagaaaatgcttgatattgttgaatcatttaca
ttcgcaattcctgctgctcgagctcctccacctgtttgctggtgcagcaaaggaaagtct
cctgtttttattgatccggaatatagagaaaaatgcatgaacaagttttctcccactctg
tctcctataaggtctgctattgttcgtcgtcaagtctactttcctgataggcgtttgatc
cagtttgattgtgggaagttgcaggaacttgcaattctgttaaggcgtttgaagtcagaa
gggcacagggccttgatatttactcagatgactaagatgcttgacgtcttggaagagttc
ataaatttatatgggtatacatatttacgtttagatggttctactcccccagaagagagg
cagactctgatgcagaggttcaacacaaacccaaagtttttccttttcattttgtccact
cgtagtggtggtgtgggagtcaaccttgtaggtgcagacactgtcatcttctatgacagt
gactggaaccctgcaatggaccaacaagcacaggacagatgccacaggattggtcagact
cgtgaagttcacatatatagactcattagtgaaagcactatagaggagaacattctcaag
aaagcaaatcagaaacgagctcttgatgatttagtgatacaacgtggtagctacaatacg
gaattcttcaagaaacttgatcctatggagttcttttccgggcacacgtctctccatgcg
gaagatcaggagaagaattgctctacaaccgcgggagcttcaaatgatgtggatctggct
ctgtcaaatgcagatgttgaagcagctatcagacaggcagaagatgaagctgactatatg
gctctcaagaagctggaggaggaagaagccgtggacaatcaagaattcagtgaggaggtt
gcgggcagaccagaggaggatgaattggttaatgaggaggatggaaaacctgatgagcac
attaatgaagaacacaaatacaactcttctgatgtagagaaggagaagcacattactttg
tctaccaagcgattgagcgatgaaaaggctcttacattggcaggcgatgaagatactgac
atgcttgctgatgtgaaacagatggcagctgcagcagctgcagcaggccaagcaagttca
tcttttgagaaccagctccggccaattgatagatatgcaatgcgctttatggaactctgg
gatccagtaattgacaaagctgctgtgaatcatcaagtaaatgttgaggaggaagaatgg
gagcttgatcgtattgaaaaactcaaagaggatttggaagcagaaattgatgaagaccaa
gaaccactgtcttatgaatcatgggatgttgattttgctacaacagcctatcggcaacat
gttgaggctttagctcaaaagcagttgttggaagaacaggaaagacaggcccaggaagca
gcaaaagagttggaggagaagaatgataatatgagcagtcaccgcagaaagtcaaaaaag
aacaaaaagaagacaggcaaattcaagtccctgaaaagagtgcgtttgtcatctgaatca
gaagtcgtactggaggaaacctctgtagatacaatgagcattgatgacaatgcgccctca
cttgagcttataagtgatgaatcgccacaccattattctaacaagcgtaagaagattatg
tctgctactgaggaagatagtaacagcagaagtttaaagaagtttaagaaaactactaag
tcaagttttgtttctgaagccttgtcacctaggctgaaggaggaccttaatgatttagat
ccaaaatcaatggctagaactaaaagtgatggcagaatttccatcccctgcatgccagta
aaacgtgttattgtaataaagcctgagagattgaaaaggaagggaatatggtctcgagat
tgtgcttcagactcatggacatctgaggaagatgcagttctttgtggaactgtgcatgag
tatggtcctctttgggaattggcaagtgattttcttcattccttgccaggtgggtcctat
aggggaagatatcatcatcctgtgcattgctgtgagagatacagagaactgttctgcaaa
catgcaatatcagcaacagataattctaacagtgaaaaggttccttctgggactggaaag
gctatacttagagtatctgaggatcaagctcagatgttggtgaatgtgaccagtgaactt
cctaacaatgaattgcttctccagaaacacttcatggctgtaatttcgtctgtctggaga
tcaaaatgtcgccgtgatccctgctgttttacaaatacttactctagtgcatcacatatg
ttttctcctgtgaagaagcctggtggatcaagtgagaactggcccatggtaaactttaga
ccaagcttcaatctagttaggaaagcccttgcagatgctcaggctaagtctacactaatg
gtgattccaccaccgtcaagaaatcaggaatactggcggaattatttagaattagagtta
gatttcttgaaagatcaacatgcttatgaggaagacttcccatctgtaataaatgtgtcc
atactggaaccagaaccatccaaacaggctccagagccagtggaacaatcgttattgtct
ggactttcttgtagacaagctgagaaccgactcaggatggcatcagaagcttgttatgat
ggtgatagttctcattgggcatcatcagctttccacataaatgatgccacccgccataaa
tctggttcaaagtccataggaaagcacaaagcagcatcggaatctggtagacctaccaaa
tccaaagtccagaagattactgaatcgcatcaggaagggccaactgtcatgagtaatttt
ctccatatgcctgctcaactattgccaagtacagctgacttccacattagtgactcccta
tctgaatttggtatcagcgattctgaattctacttctctgaggatctcttgcaagaggtc
gacgatctcgagttcttcccagatcagggtgactctggtctccttcctggtattgaagag
ttagaacctctttcagatttcacagatatcggatga
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integrated database retrieval system
