Miscanthus floridulus: 136467506
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Entry
136467506 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 2-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
mflo Miscanthus floridulus
Pathway
mflo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
136467506
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mflo02000
]
136467506
04147 Exosome [BR:
mflo04147
]
136467506
04090 CD molecules [BR:
mflo04090
]
136467506
Enzymes [BR:
mflo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
136467506
Transporters [BR:
mflo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
136467506
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136467506
CD molecules [BR:
mflo04090
]
Proteins
136467506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_16
AAA_22
Zeta_toxin
DUF87
RsgA_GTPase
AAA_30
NB-ARC
AAA_23
HUTI_composite_bact
AAA_7
Motif
Other DBs
NCBI-GeneID:
136467506
NCBI-ProteinID:
XP_066322329
LinkDB
All DBs
Position
7:complement(108578777..108594597)
Genome browser
AA seq
1255 aa
AA seq
DB search
MSSSSENGAGPEASGKKKKAEEEAAKVPFLKLFSFADRWDCVLMAVGSLGACAHGASVPV
FFIFFGKLINIIGLAYLFPTTVSGRVAKYSLDFVYLGIVILFSSWTEVACWMHTGERQAA
KMRLAYLRAMLDQDIAVFDTEASTGEVINAITSDILVVQDAISEKVGNFMHYISRFLAGF
AIGFSQVWQISLVTLAIVPLIAIAGGTYAYVTIGLMARVRKSYVKAGEIAEEVIGNVRTV
QAFVGEEKAVRSYREALLRTYKYGKRGGLAKGLGLGSMHSVLFLSWALLIWFTSVVVHKR
ISNGGESFTTMLNVVIAGLSLGQSAPNISTFLRARTAAYPIFQMIERSTVNKASSKAGRT
LPAVDGHIQFRNVHFSYPSRPDVVILDRFSLDFPAGKIVAIVGGSGSGKSTVVSLIERFY
EPLSGSILLDGRDIKELDVKWLRRQIGLVNQEPALFATSIRENILYGKGDATMEEINHAA
KLSEAITFINHLPDRYETQVGERGIQLSGGQKQRIAISRAILKNPSILLLDEATSALDAE
SEKSVQEALDRVMVGRTTVVIAHRLSTIRNADTIAVVDGGRIVETGTHEQLMANPCSAYS
SLIQLQEAAQLQHKPSLSDSASITRPLSFKYSRELSGRTSMGASFRSDKDSISRYGAGEV
HDEVRKGKPVSMKKLYSMVRPDWFFGVSGTISAFVAGSQMPLFALGVTQALVSYYMGWET
TKLEVRKIAVLFCCGAVLTVVFHVIEHLSFGIMGERLTLRVREKMFSAILRNEIGWFDDT
SNTSAMLSSRLEADATLVRTIVVDRSTILLQNIGMIVTSLIIAFILNWRITLVVLATYPL
MVSGHISEKMFMKGYGGNLSKSYLKANMLAAEAVSNIRTVAAFCSEEKVIKLYADELKEP
SKRSFRRGQGAGLFYGVSQFFLFSSYALALWYGSVLMSKELASFKSVMKSFMVLIVTALA
MGETLAMAPDIIKGNQMASSVFEILDRKTDVRIDTGEDIKRVEGLIELRGVEFRYPARPD
VTVFKGLDLLMKAGKSMALVGMSGSGKSTVLSLILRFYDPSPGRVLIDGKDVKKLKLKSL
RKHIGLVQQEPALFATTIYDNILYGKDGATEAEVVEAAKLANAHSFISSLPEGYKTKVGE
RGVQLSGGQKQRIAIARAIVKDPAILLLDEATSALDVESERVVQQALDRVMKNRTTVMVA
HRLSTIKNADVISVLQDGKVIEQGAHQHLIENKNGAYHKLVNLQQQQQMQTQQSS
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgtcgtcggagaatggcgccggcccggaggccagcgggaagaagaagaaggcg
gaggaggaggcggccaaggtgccgttcctgaagctgttctcgttcgcggaccggtgggac
tgcgtgctgatggcggtgggctcgctgggcgcgtgcgcgcacggcgcctccgtcccggtc
ttcttcatcttcttcggcaagctcatcaacatcatcggcctcgcctacctcttccccacc
accgtctctggccgcgtcgccaagtactcgctggacttcgtgtacctcggcatcgtcata
ctcttctcgtcgtggaccgaggtggcgtgctggatgcacacgggcgagcggcaggcggcg
aagatgcggctggcctacctgcgcgcgatgctggaccaggacatcgccgtcttcgacacg
gaggcgtccaccggcgaggtcatcaacgccatcaccagcgacatcctcgtcgtccaggac
gccatctccgagaaggtgggcaacttcatgcactacatcagccggttcctggccggcttc
gccatcggcttctcgcaggtgtggcagatcagcctggtcaccctcgccatcgtcccgctc
atcgccatcgccggcggcacctacgcctacgtcaccatcggcctcatggcccgcgtccgc
aagtcctacgtcaaggccggcgagatcgccgaggaggtgatcggcaacgtgcggacggtg
caggcgttcgtcggcgaggagaaggccgtgaggtcgtaccgggaggcgctgctgaggacg
tacaagtacggcaagaggggcggcctcgccaagggcctcggcctcggctccatgcactcg
gtgcttttcctctcctgggccctgctcatctggttcaccagcgtcgtcgtccacaagcgg
atttccaacggcggcgagtccttcaccaccatgctcaacgtcgtcattgctggcctgtcg
ctcggccagtcggcgccgaacatctcgacgttcctgcgggcgaggacggcggcgtacccc
atcttccagatgatcgagaggagcaccgtgaacaaggcgagctccaaggccggccgcacg
ctgccggcggttgacgggcacatccagttccgcaacgtccacttcagctacccgtcacgg
ccggacgttgtcatcctcgataggttcagcctggacttcccggccggcaagatcgtcgct
atcgtcggcgggagcgggtccggcaagagcaccgtcgtctcgctcatcgagcgcttctat
gagccgctgtccggctccattctgcttgatgggcgcgacatcaaggagctcgacgtcaag
tggctgcgccggcagatcgggctggtcaatcaggagccggccctgttcgcgacgagcatc
cgggagaacatactctacggcaaaggcgacgccaccatggaggagattaaccacgcggcg
aagctgtcagaggctatcacattcatcaaccatctgcctgatcggtacgaaacgcaggtc
ggagagcgcgggatacagctttccggcggccagaagcagcgcatcgcgatctcgagagcg
atactgaagaacccgtcgatactgctcctcgatgaggcgacgagcgcactggacgccgag
tccgagaagagcgtgcaggaggcgctggaccgcgtcatggtcggccgcaccaccgtggtg
atcgcgcaccgcttgtccactatccggaacgccgacacaattgcagtcgtcgacggaggc
aggatcgtcgagacaggcacgcacgagcagctcatggcgaacccgtgcagtgcctactcc
tcgctgatccaactccaagaggccgcccagcttcagcacaagccttctttgtctgacagc
gcaagcattaccaggccactaagtttcaagtattcaagggagttgtccgggaggacgagc
atgggcgccagcttccgctccgacaaggactcaatcagcaggtacggcgccggcgaggtg
catgacgaagtgcgcaaggggaagcccgtgtccatgaagaagctctactccatggtgcgc
ccggattggttcttcggcgtgtcgggcaccatcagcgcgttcgtggctggctcccagatg
ccgctcttcgcgcttggcgtcacgcaggcgctggtgtcctactacatggggtgggagacc
acgaagctggaggtgcgcaagattgccgtgctcttctgctgcggcgccgtgctgacagtc
gtgttccacgtgattgagcacctcagctttggcatcatgggcgagcggctcaccctgcgg
gtacgggagaagatgttctcagccatactgcggaacgagatcggctggttcgatgacacc
agcaacacgagcgccatgctgtcatcgcggctcgaggctgatgcaacgcttgtgcgcacc
atcgtcgtcgaccgctccaccatcttgctccagaacatcggtatgatcgtgacatcgctc
atcattgcattcatactcaactggaggatcacgctggtcgtcctcgccacctatcccctc
atggtcagcggccacatcagcgagaaaatgttcatgaaaggctatggcggcaacctcagc
aagtcctatctgaaggccaacatgctcgccgcggaggcagtgagcaacatccggacggtg
gctgccttctgctcggaggagaaggtgataaaactctacgcggacgagctgaaggagcct
tctaagaggtccttccggcgaggccagggcgccggactcttttacggagtctcccagttc
ttcctcttctcctcttacgcactggcgttatggtatggttcagtgctgatgagcaaggaa
ttggccagcttcaagtccgtgatgaagtccttcatggtgctcatagtgacggcactggcc
atgggggagacactagcaatggcacctgatatcatcaaagggaaccagatggcgtcctcg
gtgttcgagatcctggaccgtaagacggacgtccggatcgacacaggtgaggacatcaag
agggtcgaggggctgatcgagctgcgcggcgtcgagttccgatacccagctaggcccgac
gtgaccgtgttcaagggccttgacctgctgatgaaggccggcaagagcatggcacttgtc
ggaatgagcggctccggcaagagcaccgtgctgtcgctcatcctccggttctacgacccg
tcgcctggaagagtcttgatcgatgggaaggacgtcaagaagcttaagctgaagtctctg
aggaaacacatcggcctggtccagcaagagccagcgctcttcgcgacgacgatctacgac
aacatcctgtacggcaaggacggggccacggaggccgaggtcgtcgaggcggcgaagctg
gcgaacgcgcactcgttcatcagctcgctgccggaggggtacaagaccaaggtcggggag
cgcggcgtgcagctgtcgggcgggcagaagcagcgcatcgcgatcgcgcgagccatcgtg
aaggacccggctatcctgctactggacgaggcgacgagcgcgctggacgtggagtcggag
cgcgtcgtgcagcaggcgctggaccgggtgatgaagaaccggaccaccgtgatggtggcg
caccggctgtcgacgatcaagaacgccgacgtcatctcggtgctgcaggacggcaaggtt
atcgagcagggggcgcaccagcacctgatcgagaacaagaacggcgcctaccacaagctc
gtcaacttgcaacagcagcaacaaatgcagacgcagcagagctcatga
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integrated database retrieval system
