Miscanthus floridulus: 136467713
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Entry
136467713 CDS
T10264
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic-like isoform X1
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136467713
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136467713
Spliceosome [BR:
mflo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
136467713
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_ISE2
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
IstB_IS21
Ski2_cyano_M
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
136467713
NCBI-ProteinID:
XP_066322579
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All DBs
Position
7:complement(118279135..118290033)
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AA seq
1176 aa
AA seq
DB search
MHCIAPRLLLFPLPTVSRHALSPTQTLPLPLILPSRACRLHLASARSPSRAAASVSDDDE
DEEVDVDDDDDEIGIRDVDDEYYDDFGDGDEGDEADEEAVDEESGGEYEEEAEEDEDEDE
REDTAARRRESEEYKSRRVAKLVAEVREFGEDIIDYNELAGIYDFPIDKFQRLAIQAFLR
GSSVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRDTFGDHNVGL
LTGDSAINKDAQILIMTTEILRNMLYQSVGMTASEGRLFQVDVIVLDEVHYLSDISRGTV
WEETVIYCPKEVQLICLSATVANPDELAGWISQIHGKTELVTSNKRPVPLTWHFSKKYSL
QPLLDGKGKKMNRKLRMSNFQNLSSPKSEFYYVKGKRRFRTNKIEQGNSSSFDISKQVQL
SKHELSNMRRSQVPLIRDTLSQLWENDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCEAS
EVELELRRFKMQYPDAVRESAVKGLLRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATE
TLAAGINMPARTAVMSSLIKRIDAGRQLLTPNELFQMAGRAGRRGIDTVGHAVLVQTPYE
GPEECCDIIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESDDVKVKRSGRTLEEARK
LVEQSFGNYVGSNVMVAAEEEIERIQQEIQYLSSEITDESIDRKCREELSEEDYAEISLL
QKRLKEEKQIRNELKKKMELERMAAWKNRLAEFESGHLPFMCLQYKDKDSIQHTIPAVFI
GNLNSFADQKITNMVEDDSLVSGKQKLDSGEQLYCPSYYVALSSDNSWYLFTEKWIKTVY
KTGLPAVASVEGGTLPRETLKQLLLREELMWDKVAKSEYGSLLSMDGSLDTWSWSLNVPV
LNSLSEDDEVERFSQEHQDAVECYKQQRRKVSHLKKTIKSTKGFKEFQKIIDIRNFTKEK
IERLEARSRRLTRRIRQIEPTGWKEFLQISRVIQEARALDINTQVIYPLGETAAAIRGEN
ELWLAMVLRNKVLLDLKPSQLAAVCGSLVSEGIKLRPWKNSSYVYEPSSVVTGVISYLEE
QRNSLIDLQERHGVKIPCEIDAQFAGMVEAWASGLTWREIMMDSAMDDGDLARLLRRSID
LLAQIPKLPDIDPVLQKNAQIACSVMDRVPISELAG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgcactgtatcgccccccgcctgctcctcttcccactcccgaccgtctcgcgccacgcg
ctctcgccaacccagacgctacctcttcctctcatcctcccctcccgcgcctgtaggctc
cacctcgcctccgcgcgctcgccgtcccgcgccgccgcttcggtttctgacgacgacgag
gatgaggaggttgacgtggatgacgacgacgacgagataggcatccgcgacgtagacgat
gaatactacgacgatttcggtgacggggatgagggagatgaggccgacgaggaggcggtg
gacgaggagagcggtggtgagtacgaggaagaggcggaggaggacgaggacgaggacgag
agggaggataccgcagcgcgaaggcgggagtcggaggagtataagtcgcggcgggtggcg
aaactggtcgctgaggtgcgggagttcggggaggacatcatcgactacaacgagctcgcc
gggatctacgacttccccatcgacaagtttcagcgcttggctatacaagcatttttaaga
ggttcatctgttgtagtttctgcacctacaagtagtgggaagacattaatagcagaagct
gcagcagtcgcaacagtagctagaggaaggcgtctcttctacacaacaccattaaaggcc
ttgtcaaaccagaagttccgtgatttccgggatacctttggtgatcataatgttggcctt
cttacaggagattctgctatcaacaaagatgctcagatcctaattatgacgacagagatt
ttacgtaacatgctgtaccaaagtgttggcatgacagcctctgaaggtagattatttcaa
gttgatgtcattgttttggacgaagtccattatttgagtgatatctcacgtggcactgtt
tgggaagaaactgtcatatattgtccaaaggaagtccagcttatatgtctgtcagccact
gttgcaaatcccgatgaattagctggctggataagtcagattcatggtaaaacagagctt
gtaacatcgaacaaacgtccagttccgcttacttggcacttctcgaagaaatactcattg
caaccacttcttgatggaaaggggaaaaaaatgaataggaaactgcggatgtctaacttc
caaaacttatcatctccaaagagtgagttctattatgtcaaaggaaagaggagatttaga
acaaataaaattgagcaaggtaatagcagctcttttgacatatcgaaacaggttcagtta
tcaaagcatgaactcagcaatatgcgccgttcccaagttccactaatacgtgacacttta
tcacaactatgggaaaatgacatgcttccagctatttggtttatttttagtagaagaggg
tgtgatgcagctgttgagtaccttgaggattgcagactgttgcatgactgtgaggctagt
gaagttgaactggaacttaggaggttcaagatgcaatatcctgatgctgttcgagaaagc
gctgtgaaaggactgttgcgaggagttgcggcccatcatgctggttgcttgccactgtgg
aaatcatttattgaagaattatttcagcgtggccttgttaaagtagtttttgcgacagaa
acccttgcagctgggattaatatgcctgctaggacggctgtgatgtcttctctcatcaaa
agaatagatgctgggcgccagctcttaaccccaaatgaactattccagatggcaggtcgt
gctggaaggagagggattgatacagttgggcatgctgttcttgttcagactccatatgaa
gggcctgaagagtgttgtgacatcatctttgccggacttgagccacttgtctcacaattc
actgcatcatatgggatggttttgaatcttcttgccggttcaaaagttacacataatcag
aaagaatcggatgatgttaaggtcaagcgctctggaagaaccttagaagaagctcgaaag
ctcgtggagcaaagctttgggaattatgttgggagcaatgtaatggttgctgccgaagaa
gagattgaaagaatacagcaagaaatacaatacctctcttcagaaattactgatgaatct
attgaccgaaaatgcagggaagaattatcagaggaagactatgctgagatttcccttcta
cagaagagactaaaggaagagaagcagatcagaaatgagctgaaaaaaaagatggaactg
gagagaatggctgcatggaaaaatcggttagcagaatttgaaagtggccatcttcctttc
atgtgcctgcaatacaaagataaggattcaattcagcacacgatccctgctgtatttatt
ggaaacctcaactcatttgctgatcaaaagatcacgaacatggtggaagatgattcactt
gtttctggcaagcagaaacttgatagtggggaacaactctattgcccatcttactatgta
gctttaagttcagataattcatggtatttgttcacagaaaaatggataaaaactgtttac
aagacaggtctacctgctgtcgcttctgttgaagggggcacactccctagagaaaccctg
aagcagctccttctgcgtgaagagttgatgtgggataaagttgcaaaatcagaatatggc
tctttgttaagcatggatggttctttagacacatggtcgtggagtctcaatgttcctgtg
cttaatagcctttcggaagacgatgaggtagaacgattttcccaggaacatcaagatgct
gtagaatgctacaagcaacagaggaggaaggtttcacatttgaagaaaacaataaagagt
actaagggtttcaaagaattccaaaagatcatcgacataagaaattttacaaaagagaag
attgagcgcttggaagctagatcccgtcgcttgactcgacggataagacaaattgaaccg
accggttggaaagaatttctccagattagcagagtcatacaagaggctagagcattagat
atcaatactcaggtaatctatcctttgggtgagacggcagcagctatacgaggggaaaac
gagctctggcttgctatggttctaaggaacaaggtcctcttggatctaaagccatctcaa
ctggcagcggtttgtggaagtttagtctcggaagggatcaaacttcgtccttggaaaaat
agcagctatgtatatgaaccttcttctgttgttactggtgttataagttatttagaagag
cagagaaattcgctaattgatctccaagagagacatggtgttaagataccttgcgaaata
gatgcccagtttgctgggatggttgaagcctgggcttcagggttgacctggagggagata
atgatggactctgcaatggacgatggagatttagcccgtctactcaggcgctcaatagat
ttactagctcagattccaaaactgcccgacattgatccagttctccaaaagaatgcacaa
attgcttgcagcgtcatggaccgagtaccgattagtgagcttgctggttga
DBGET
integrated database retrieval system
