| Entry |
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| Name |
(RefSeq) THO complex subunit 5A-like isoform X1
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| KO |
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| Organism |
mflo Miscanthus floridulus
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:mflo00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136467810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mflo03019]
136467810
03041 Spliceosome [BR:mflo03041]
136467810
Messenger RNA biogenesis [BR:mflo03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
136467810
Spliceosome [BR:mflo03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
136467810
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
7:complement(123123385..123131279)
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| AA seq |
797 aa
MAAAPTAEAMDVDAPARPLTTSSATKSRSPHDLLAETRASIEKVASRMLAIKKDGAPKSE
LRELVTQMSLLLVTLRQVNREILMEEDKVKAETEAAKVPVDSTTLQLHNLLYEKNHYVKA
IRACLDFQTKYPGIELVPEEEFQRSASADILEKTLAADASHDLMLKRLNFELVQRKELCK
LHEKLEQQKSSLLETIANQKKFLSSLPSHLKSLKKASLPVQQQLGMQHTKKLKQHHAAEL
LPTPLYIAYTQLIGQKEAFGENIEVVITGSTKDAQIFAQQQAKKLNAGTLSNGDSRMDDD
VIDDEEDAQRRRSRSKKNVAKEANNPAVAYQLHPLKIILHVYDTEDSGSKRRKLITLRFE
YLAKLNVVCVGIEDSEGLNSNILCNLFPDDTGLDLPHQMAKIYAGEVPNFSDKDSRPYKW
AQHLGGIDFLPEVPPSVGDDSSRELSSADLSSGLALYRQQNRAQAILQRIRLRKVAQMAL
MWQLDYLTKLKWPRIEHKNAPWASRNPLCSLHSWSLTSSYPEPSSRSILMISGSASNVDS
DVERSVTKWEETEGTREDGELPVVIPAENEPNGSTILHPEVSPEIRSHSRGLSLISKSAT
PSKLSISQSFGRNEDDLDLLMYSDNELEDSTCILDETEKASPIIDRSWEDYASKEFTMVL
SKTMKNGPKVMLEVKVKISIEYPLRLPLFRLRLLSEKSETLKWHNDLRAMEAEVNLHILR
SLPPSYDDYILTHQVMCLAMLFDMHFDEEHEKRKIISVIDVGLCKPVSGTMLTRSVRGRD
RRQTIYWRGADCSSSYL |
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| NT seq |
2394 nt +upstreamnt +downstreamnt
atggcggcggcgccgacggcggaagccatggacgtcgacgcgccggctaggccgctgact
acctcctcggccaccaagtcgcgctcccctcacgacctcctcgccgagacccgcgcctcc
atcgagaaggtcgcctcccggatgctcgccatcaagaaagacggcgcccccaagtcggag
ctccgcgagctcgtcactcagatgtcgctgctcctcgtcacgctacgccaagtgaacagg
gagatcctgatggaggaggacaaggtcaaggcggagacggaagccgcgaaggtgccggtg
gactccacgacgctgcagctgcataacctgttgtacgagaagaaccactacgtgaaggcc
ataagggcgtgtctcgactttcagacgaagtatccggggatagagcttgtgcccgaggag
gagttccagcgttccgcgtcggcagacatccttgagaagaccctcgctgccgacgcctcc
catgacctcatgctcaagcgcctcaactttgagctcgtccagaggaaagagttatgcaag
ctacacgagaaattagaacaacagaagagcagcttgctggagacaattgctaatcagaaa
aagttcctttcaagccttccatcacatttgaaatcattgaagaaagcatcattgccagtg
cagcaacagttggggatgcaacataccaagaaactaaagcagcaccatgctgcggagtta
cttcctactccgctttatatagcatacactcagttaatagggcagaaagaagcatttgga
gagaatattgaagtagtgatcacgggaagcacaaaggatgcccaaatatttgctcaacag
caagccaagaagttaaatgcaggcactctttcaaatggcgacagcagaatggatgatgat
gtgattgatgatgaagaagatgctcagagaagaaggtcaagatccaaaaagaatgtggcg
aaggaagctaataatccagcagtggcctatcaacttcacccacttaaaattatcctccat
gtatatgatactgaagattctggtagcaaacgccgtaaactcatcaccctgaggtttgaa
tacttggcaaagttgaatgttgtttgtgttggaattgaagattcagagggtctgaacagt
aatatcttgtgcaacctatttccagatgacactggtttagatctgcctcaccagatggct
aagatttacgctggggaggttcctaacttcagcgacaaggattcaaggccatacaagtgg
gcacaacatttaggtggtatcgactttttgcctgaagtgcctccatctgttggggatgat
tctagcagagaattaagcagtgctgatttgtcatctgggcttgctctataccgtcagcag
aaccgtgcacaggctattttgcagagaatccgcttgcggaaagttgcccagatggctctt
atgtggcaacttgattatttgacaaagctgaagtggcctcgaatagaacataagaatgca
ccatgggcatcacgcaacccactgtgcagtctacatagttggtcattgacaagttcttat
cctgagccatcgtctcgttctattttgatgataagtgggtctgcaagcaatgttgacagt
gatgtagagagatctgtaacaaagtgggaagaaactgagggtaccagggaggatggggag
cttccagttgtgattcctgctgagaatgagccaaatggttctacaattttgcaccctgag
gtgtcacctgagattcggagccattctagaggcttatccctgatatcaaagagtgcaaca
ccatctaagctaagcatctcacaaagttttggtagaaacgaggatgatcttgatctcttg
atgtatagtgacaacgagttggaggactcgacctgtattcttgatgaaactgagaaagct
agcccgattatagacagatcctgggaggactatgcttccaaggagtttaccatggtcttg
agtaaaactatgaagaatggtccaaaagtcatgctggaagtcaaggttaagataagtata
gagtatcctcttagacttccccttttcagattacgtttgctctcagaaaagtctgaaact
ttaaagtggcacaatgatcttcgtgcaatggaagctgaggtaaatcttcacatccttcga
agcctacctccatcatatgatgattatatattgactcaccaagttatgtgcctggctatg
ctgtttgacatgcattttgatgaggagcacgagaaaagaaaaattatttcagtgatcgat
gttggtctttgcaaacctgttagtggaactatgcttactagatcggttaggggaagagac
cgaaggcagactatttattggagaggtgctgattgctcttccagttacttgtag |
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