Miscanthus floridulus: 136467832
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Entry
136467832 CDS
T10264
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mflo Miscanthus floridulus
Pathway
mflo04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
136467832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mflo04040
]
136467832
Ion channels [BR:
mflo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
136467832
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
136467832
NCBI-ProteinID:
XP_066322720
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Position
7:complement(123600938..123619813)
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AA seq
764 aa
AA seq
DB search
MTDQERDDVPMLLRNVELPRFPLRSTSMCIPVRDDEYEEDTFVPHTGPLFVQPPTQTAPG
IPFTSRDTPDRLPRPSQGKQVSKPHAILPEEIRGNRWSYSGQVPKNEHLMMSGPLGQCDN
ADCVNCPPACRNRRHFQRGSNALDNKIHNILYGHSGGWKKKIEQIMAYIPIMNPHAKPVQ
QWNQFFVISCLIAIFIDPLFFFLLSVRQDGNCIVLNWNFATGLAVVRSVTDAIYFLHMLL
QFRLAYVAPESRVVGAGDLVDEPKKVAIHYLCGYFFLDFFVVLPLPQVMILLVVPKVGLS
AANYAKNLLRATVLLQYVPRIIRFVPLLDGQSANGFIFESAWANFVINLLMFVLAGHVVG
SCWYLFSLQRVNQCLRDACSASTIPYCDSFIDCGRGIGSGLYRQQWFNDLGAEACFNTGN
NATFQYGIYEQAVLLTTEDSAVKRYIYSLFWGFQQISTLAGNLVPSYFVWEVLFTMAIIG
LGLLLFALLIGNMQNFLQALGRRRLEMQLRHRDVEKWMSHRRLPEDLRRRVRRAERFTWA
ATQGVNEEELLSNLPEDIQRDIRRHFFRFLNKVRLFTLMDWPILDAICDKLRQNLYISGS
DILYQGGTVEKMVFIVRGKLESISADGSKAPLHDGDVCGEELLTWYLEHSSANRDGGKIK
FQGTRLVAIRTVRCLTNVEAFVLRASDLEEVTSQFARFLRNPQVQGAIRYESPYWRTIAA
TRIQIAWRYWKRQLKRAEKSRLSEETYTSHGISTHDSFQRGQRG
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccaggagcgagatgatgttcccatgttgctaagaaatgttgagctaccaaga
tttcctctaagaagtacttcaatgtgtataccagtcagggatgatgaatatgaagaagac
acctttgtaccccatactggtcctctatttgttcagccgccaactcagacggcaccagga
attccatttacaagtagagacacacctgataggcttcctagaccttcacagggaaaacaa
gtcagcaagccacatgcaatcttgcctgaagaaattagaggaaataggtggtcttacagt
ggacaggttccaaagaatgaacacttgatgatgtctggacctttggggcaatgtgataat
gctgactgtgtgaattgccctcctgcttgtagaaatagaagacatttccagagaggttcg
aatgctttagacaataagattcataacattctttatggtcacagtggtggatggaagaag
aaaattgagcagatcatggcatacattccgattatgaacccacatgcaaagccggttcag
cagtggaatcaattctttgtcatatcatgcctgattgccattttcattgatcccctgttc
ttcttcttactatcagtacgtcaggatggcaactgcatagtgttaaattggaactttgct
acaggacttgctgttgtgagaagtgtgactgatgctatttatttcctgcacatgctgctt
cagttcagactggcttatgttgcgccagagtcacgagtggtgggagctggagacttggtt
gatgagccaaagaaagttgctatccattatctttgtggttacttttttcttgatttcttc
gttgtgcttccactccctcaggtgatgatactgctagttgttcctaaagttgggttatct
gctgcaaactatgctaagaatttattgcgtgccactgttcttcttcaatatgtgccccgt
atcatcagatttgtaccacttcttgatggtcagtccgccaatggattcatatttgagtca
gcatgggctaattttgtgatcaatcttctgatgtttgttttggcgggacatgtggttggt
tcatgttggtatctctttagcttacagagggttaaccaatgtctacgagatgcttgttct
gcatcgaccattccatattgtgactcttttatagactgtggacgtggcattgggagtgga
ctgtacagacagcagtggttcaatgacttgggtgcagaagcttgttttaacactggaaat
aatgctactttccaatatggaatttatgagcaagctgttttgctaactacagaagacagc
gctgtaaaacgatatatatattcattattttgggggtttcagcaaataagtaccttagca
ggaaaccttgtcccgagttactttgtatgggaagttctgttcacgatggctattattggt
ctgggactgttgctttttgcattgcttattggaaacatgcaaaattttctccaagctctt
ggaagacggagattggaaatgcaacttaggcaccgtgatgttgaaaagtggatgagccat
agacgattgcctgaagatttgagaaggagggttagacgagctgaaaggttcacctgggct
gctactcaaggagtgaatgaagaggagcttttgagtaatttacctgaagatatccaaagg
gacatacgtcgccacttctttagattccttaataaggtccgattattcaccttgatggat
tggcctatcttggatgcaatatgtgacaaattaagacaaaacttatatattagtggaagt
gacattctttatcaaggtggtactgttgaaaagatggtcttcatagtgagagggaagctg
gaaagcatcagtgcagatggtagcaaggctccattacatgatggagatgtatgtggagag
gagctcctcacctggtacttagaacattcttcagcgaatagagatggtgggaaaattaaa
ttccaaggtacgcggttggttgctatacgcacagtaagatgtttaacaaatgttgaagct
tttgtactcagagcaagtgatctggaagaagtaacctcacagtttgctcgattcttgcgt
aatccacaagtgcagggagcaatcagatatgaatccccgtactggcgaaccattgctgca
actcgtattcaaattgcatggaggtattggaaaaggcagctgaagcgagctgagaagtca
aggttgagcgaagagacttatacctcgcatgggatctcgacacatgattcttttcagcgt
ggacagaggggatga
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