Miscanthus floridulus: 136468043
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Entry
136468043 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K18734
protein SMG8
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136468043
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
136468043
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Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
136468043
NCBI-ProteinID:
XP_066322998
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Position
7:132950587..132955819
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AA seq
1166 aa
AA seq
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MEPPPPPAPATHSAPVRVLSRTPPPASPTPSSASPAPSPASRDGVVAVGFVGGAGSARLA
DRILDAHVFSPGGSAGTLAGSVRYHRDAGRRMVFLHLTPPPAPLQAAVRGCGDGDLPDPE
MLFMFSVCHVIIFMQEGFRFNTQTLKKFRLLQSSKHALAPFVKSLVAAAMPAKTVASDAP
TRATHRASSISPPARRGGHAGRQSSAISLMSGTSSNPSVLPGQCIPALLFVFEDDAVDVS
SAAASSDDMGDASSSNQGSTSDGLSKQSLASKSSGSVVMLARAANKSEGNSGKKLYSSLE
GQIRVLLKKCRVLAGMEPGHIGLRGVSNMSHHLPLFSLDTSRVVALLERYVNKKREPLDI
IAGLFEDSLCSKSPLDILSLENNYNPTNSDDFQLIKDFIFRQSDALRGRGGYSSNASAGS
VSGVGMVAAAAAAAAASAASGKPVNAPDLPTFDKWFSISTSILTALLSGRNVLSGQSESK
THTSPIEKNDQLPAAGSNAIEIALSCLESNNGLNMKFSSSWCQRVLPAAKEIYLKGLPAF
YPTSMHEVQLQKALRSFGSMVKGPAVRVFSKKLEHECRAIWESGRQQCDAVSLTGRPCKH
RRHGDFSSSDAMKQHSSGYVFLHACACGRSRRLRDDPFDFETANVSFSCFQNCDDLLPTL
ALPRGSDAGSFSVSSWRLVRLGGARYYKPTKGLLQSGFSSKERYLLRWIISVGKGQVRNG
IRSNTVTSSTRSGMNPQTPPMVTGEVKSAVTQVTAQIKSAKLESSGKQPEMEPMSNSGIN
FGKGLPNFIMKKPFAEVVAGTTSKDSEFPALQQMRPPKPGGRKDERQMNIGDQANGRGHA
AVSQGPVAETESAKASRSKSSEHSDGKPFLQIGSNIVPVMVGDETRETNQPVQQFVVYVG
FEHECPYGHRFLLSEKHMKEIDPSCLQYQRPHLNKEAEGKHAQKLLQNASGLIASAVDIN
STRKNSKPLQSSGRNSQQQSLQLRVDAETSQPSPWLSDPQNGKRGEHYFPSITIDDGGEA
FSLMNRNLPIYMHCPHCKISERKEHQDVKFAGAVSQLQRIFIVTPDFPVLLASCPLVQFE
GSCLPSNVSDHDREGSFSIGCRVILPPESFLTMRLPFVYGVETKEGSTFPLKNFEQQPEL
TAWLVGGTALQIVSVGDVTEKETIMK
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggagccgccgccgcctcctgctccggcgacccactccgcgcccgtccgcgtgctctcc
cgcactccgccgccggcctccccgaccccctcctccgcgagccccgcaccgtcgcccgcc
tcccgcgacggggtcgtcgccgtcggcttcgtcggcggcgcagggagcgcccgcctcgcg
gaccggatcctcgacgcccacgtcttctcccccggcggctcagctgggaccctcgccggg
agcgtcaggtaccaccgcgacgccggcaggaggatggtgttcctgcacctcacgcccccg
cctgcgccgctccaggcggcggtaagaggctgcggcgacggcgacctcccggacccggag
atgctcttcatgttctctgtctgccacgtaattatatttatgcaagaaggcttcagattt
aacacacaaaccttaaagaagttccgactgctgcaatcttcaaagcatgctttggctcca
tttgtcaagtcattggtagcagctgcaatgcctgccaaaactgttgcctctgacgcccca
acaagagcaacccatagggcttcctccatatcccctccagcacgccgtggaggtcacgct
ggtcgtcagtcctcggccatctcacttatgtccggaaccagttcaaatccttctgtattg
ccaggccaatgcattcctgcattgctctttgtctttgaggatgatgcggttgatgtttca
agtgctgcagcaagttccgatgatatgggtgatgcatcttcatcaaatcagggttctacc
tctgatggattatcaaaacaaagcttagcttcaaagagttctggttcagtggttatgctt
gcccgagcagcaaacaaatctgagggtaattcaggcaaaaaactgtattcatccctggag
ggacagatccgtgtcttgctcaagaagtgcagggtacttgcaggcatggagccagggcat
attggcctgaggggtgtaagtaacatgagtcatcatttacccctgttctcactcgatacc
tcgagggttgttgcactgttggaacggtacgttaataagaaacgggagccactggacatc
attgcaggattatttgaagattctttgtgctccaaatcgccattggatattctttcactg
gaaaacaactacaacccaacaaacagtgatgactttcagttgatcaaggattttatattt
cggcagtctgatgcgctgagagggagagggggatattcaagcaatgcaagtgctgggtct
gtttctggtgttggcatggtggctgctgctgctgcagcagcagcagcatcagctgcatct
gggaaaccagttaatgcacctgatctccctacttttgataaatggttttccataagtacc
tctattctaactgcactgttgagtggaagaaatgtgctgagtggtcagtctgaaagcaag
actcatacaagtcctattgagaagaatgaccaacttcctgctgcaggatctaatgctatt
gagatcgcattatcgtgcttggaaagtaataatgggctgaacatgaaattttcttcatca
tggtgccaaagggtgcttccggctgctaaggagatttacctgaaaggtttgcctgccttt
taccccacaagcatgcatgaagtgcagctacagaaggcattgcggtcctttggctcgatg
gttaaaggaccagcagtcagggtattctcaaagaagctagaacatgagtgccgggcaata
tgggaatctggaaggcagcaatgtgacgctgttagcctaactggcagaccatgtaagcac
cgcaggcatggagatttctcttcatcagatgcaatgaagcaacattctagtggatatgta
ttcctccatgcatgtgcctgtggccggtcacgtcgccttagagatgatccttttgacttt
gagacagccaatgtgtcttttagttgtttccaaaattgcgatgatctactacctaccctt
gcgcttccaagaggcagcgatgctggttcattttcagtatcttcttggcgcttggtgcgt
ctaggaggagcaagatattacaagccaacaaaggggctcctccaaagtggatttagctcc
aaggagaggtatcttctaaggtggattatatctgttggtaaggggcaagtgagaaatggc
attcgttctaatactgttacttcatccacaagatctggtatgaaccctcagactccccca
atggtcactggtgaagtaaaatctgctgtaacccaagtcacagcacaaattaaatctgca
aagctcgaaagttctggaaaacaacctgaaatggaaccaatgagcaactcaggtattaat
tttggtaaaggtctgccaaattttattatgaaaaaaccctttgctgaagttgttgctggc
accacatcaaaagattccgagtttcctgctcttcagcagatgaggccaccgaaacctggt
ggtcgaaaagatgagcgccaaatgaatataggagaccaggctaatggccgaggtcatgca
gctgtcagccaagggcctgtagctgaaactgaatctgcgaaagcaagcagaagcaagagt
agtgaacattctgatgggaaaccctttttacagatagggagcaatatagtaccagtgatg
gttggagatgagactagagaaactaatcagccggtacaacagtttgttgtgtatgttgga
tttgagcatgagtgtccctatggtcatcgcttcttactgtcagagaaacatatgaaggag
attgatccttcctgtttgcagtatcaaagacctcatttaaacaaagaagcagaaggcaag
catgcacaaaagttgctccagaatgcatctggtttaattgcatctgcagtggacataaac
agtacacggaaaaacagtaagccattgcaatcatcagggagaaacagccagcagcaatca
ctgcagctgagggttgatgcagagacttcacaaccttctccttggctttcagatccacag
aatggcaaaaggggggagcattattttccaagcattacaattgatgatggcggagaagca
ttttcactgatgaacagaaacttgccaatatatatgcactgtccacattgcaagatctca
gaaaggaaggaacatcaagatgtaaagtttgctggtgccgtgtcgcaacttcaacggatt
ttcattgtgacacctgatttccctgtcctgttggcaagctgcccacttgtacagtttgag
gggtcatgtttgccatcaaatgtctctgatcatgatcgagaaggatcattcagtattggg
tgccgagttatcctcccacctgagagctttcttacaatgaggcttccttttgtctatggt
gttgagacaaaagagggaagcacatttcctctcaaaaactttgagcaacaaccagaactc
acagcatggcttgttggaggcacagccttgcaaatcgtatcggtaggggacgtcactgag
aaagaaaccattatgaagtga
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