Miscanthus floridulus: 136468086
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Entry
136468086 CDS
T10264
Name
(RefSeq) protein argonaute 1C-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136468086
03036 Chromosome and associated proteins [BR:
mflo03036
]
136468086
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
136468086
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
136468086
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
136468086
microRNA pathway
RISC loading complex
136468086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL2
ArgoL1
ArgoMid
Motif
Other DBs
NCBI-GeneID:
136468086
NCBI-ProteinID:
XP_066323047
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All DBs
Position
7:complement(134079753..134088404)
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AA seq
1129 aa
AA seq
DB search
MGSRRGRQHPGAGHAAQPPQPGGRGAARAQQPPQPAGRGGGGGRGGIQQQGRGGGRTSRV
DEAQQQQQQPGRGGHARGESGAGRPQQYPRGATPVQGAASSSSSPLAPELRQAMEEAPRD
FAPQAPPVQEAGPSQPSPEAPPPVQPREEHGPAEPTAGQEIVPTAPPQSSKSFRFPLRPG
KGSIGTRCLVKANHFFAELPDKDLHHYDVSITPEVTSRVVSRAIIKELVNLYKQSYLGGR
LPAYDGRKSLYTAGPLPFTSQEFHITLFDDDGGPGSERRRRNFKVVIKFAARADLHRLEL
FLAGRHAEAPQEALQVLDIVLRELPSSRPRYAPFGRLFFSPDLGRRQPLGDGLESWRGFY
QSIRPTQMGLLLNIGRTRRAYPVQRAPALCGVWGRVSVASLTLVCAMRGDCDSKRQKHIR
ARFRSWDLWVMGPPRFRCATLIFVKGRPSAGGSHMSGVWGREKPRQAFPRKICGEAASNP
RPGDSVRQLSPLHHIKKALRGVKVEVTHRGNMRRKYRISGLTTQATRELTFPVDEGGTIK
SVVQYFQETYGFAIQHTYLPCLQVGNQQRPNYLPMEVCKIVERQRYSKRLNQNQIRALLE
ETYQHPRDRERDIIRMVKQNAYDKDDYAQEFGIKISDRLASVEARILPAPWLKYNETGRE
KDCLPRVGQWNMMNKKMVDGGKVRSWICVNFARNVQDCVVRGFCHELALMRHASGMDFAR
ERVLPPLYARPDQVERALKARYHDAMNVLGPKHKELDLLIGILPDNNGSLYGDLKRVCEI
DLGIVSQCCCTKQVFKMNKQILANLALKINAKVGGRNTMLVDAVSRRIPLVTDRPTIIFG
ADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIEDLYKVWQDPQRGTV
SGGMIRELLVSFKKSTGQKPQGIIFYRDGVSEGQFYQVLLYELNAIRKACASLEANYQPK
VTFVVVQKRHHTRLFAHNHNDQNSIDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIKGT
SRPAHYHVLWDENNFSADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP
ETSDSGSVASGPAGRGPQSASHSTRGPGGAAVRPLPALKDNVKRVMFYC
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgaggagggggaggcaacatcctggtgctggccatgccgcgcagcctccgcag
ccgggcggaagaggcgctgctcgtgctcagcagcctccgcagcctgcaggaagaggagga
ggaggaggtcgtggagggatccagcagcaggggcgaggtggaggccgcacgtctcgtgtt
gacgaggcccagcagcagcagcagcagccaggcaggggcggccacgctcgtggcgagagt
ggagcggggcgcccacaacagtacccacgtggtgctacacctgtacagggggctgcctcg
tcatccagcagccctttagctcccgagctgcgccaagcaatggaggaggctcctcgtgac
ttcgcaccacaagcgccaccagtgcaagaggcaggtccttcgcagccatcgccagaggct
cccccgcctgttcagcctagagaggagcacggaccagctgagcccactgcaggccaggag
attgtgcctactgcacctccacaatcaagcaagtcattcaggtttcctttgcgcccagga
aagggcagtattggcaccaggtgcctggttaaggccaaccatttctttgctgagctgcca
gacaaggatcttcatcactatgatgtctcaatcacaccggaagttacctcaagggttgtt
agtcgagccataatcaaggagctggtcaatctctacaagcaatcttacttgggtgggagg
ctaccggcttatgatggtaggaagagcctgtacacagccggcccactgccgtttacttca
caggaatttcatatcactttatttgacgatgatggtggccctggttctgagaggcgacgt
aggaattttaaagtagtcattaaatttgccgcacgagctgacctccaccgcctcgagctg
tttttagctgggaggcatgcagaagctcctcaagaggcattgcaggttctggatattgtg
ctgcgggaactgccttcatcaaggccaaggtacgcaccatttggccggttgttcttttcg
cctgacttgggccgaaggcagccacttggtgatggattagaaagctggcgtggattttac
cagagcattcgtcctactcaaatgggcttgttactcaacattggaagaaccaggcgggcg
tacccagtgcagagagctcccgctctgtgcggggtctggggaagggtgtcagtggcaagc
cttaccctcgtctgtgcaatgcgaggagactgcgactcgaaaagacaaaaacatatcaga
gccaggtttcgatcctgggacctgtgggttatgggcccaccacgcttccgctgcgccact
ctgatctttgtaaagggcagacccagtgccggaggctcccacatgagtggggtctgggga
agggaaaaaccgaggcaagccttcccccgcaaaatctgcggagaggctgcttcgaacccg
cgacctggtgactcagtgagacagctctcaccactgcaccatatcaagaaagccttgcga
ggagttaaggtggaagttactcatcgtggaaacatgcggagaaagtatcgaatatctggg
ttaacaactcaggcgactcgagagttaacctttcctgttgatgaagggggtacaataaag
tcagttgtacagtactttcaagagacatatggctttgccatccaacacacctaccttcct
tgccttcaagttggcaatcaacagcgtccaaattacttgccaatggaggtctgcaaaata
gtggagagacagaggtactccaagagattaaaccagaatcagatcagagctcttttggag
gagacataccagcacccacgcgatcgtgagcgtgatataattcggatggttaaacagaat
gcctatgacaaggatgattatgcacaagagtttggcattaagattagcgatcgtctggca
tcagttgaggcacggattttgccagctccatggcttaagtacaatgagactggtcgagag
aaggactgcttacctagggttggtcagtggaatatgatgaacaagaaaatggtagatggt
ggtaaggtcagaagttggatatgtgtcaattttgctcgcaatgtgcaagactgtgttgtt
cgtgggttctgtcatgaacttgcactgatgcgccatgcgtcaggaatggatttcgctcgg
gagcgtgttcttccacctctatatgcacgtcctgatcaagtggagcgagctctgaaagct
aggtaccatgatgccatgaacgttcttggacccaaacacaaggaacttgatttacttatt
ggaatactacctgacaacaatggctcactttatggtgatttgaagcgtgtctgtgaaata
gatcttgggatagtttcacagtgctgttgcacaaagcaggttttcaaaatgaacaaacaa
attcttgcaaatcttgctctgaagattaatgccaaggttgggggcaggaacaccatgctg
gtagatgctgtctcaaggcgaattcctctggtaactgatcgacctacaatcatatttggt
gctgatgtgactcatcctcatcctggtgaggacagtagtccctcaattgctgctgttgtg
gcctcccaagattggccagaggtgacaaagtatgctggactagtttctgctcaagctcat
cggcaagagttgatagaggatttgtataaggtctggcaagatccacagagagggacagta
agcggtggaatgataagggagctacttgtatccttcaaaaaatcaactggtcagaagccc
caaggaataatattttacagggatggtgtcagtgaaggacaattttatcaagttctgttg
tatgagctcaatgcaatccgaaaggcctgtgcctccctggaagcgaactaccaaccaaag
gtgacttttgttgtggttcagaagcgccatcatactagattatttgctcacaaccacaat
gatcagaattcaattgacaggagtggaaacatactcccaggtactgttgtagattcgaag
atctgccatcctactgaatttgacttctacttgtgtagccatgctggcattaagggcact
agccgtccagctcattatcatgtcttgtgggatgaaaacaacttctctgctgatgagttg
cagactcttacaaacaacctctgttacacttatgcaaggtgcacccgctctgtatcgatc
gttccaccagcgtattatgctcacctagctgccttcagggctcgtttttacatggaaccg
gagacttctgacagtggttcggtggcaagtggtcctgcaggccgtggacctcagtcagca
tcccatagcactcggggccctggtggtgcagctgttaggccacttccagctctgaaggat
aacgtaaagagggtcatgttctactgctga
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