Miscanthus floridulus: 136469479
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Entry
136469479 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
136469479
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mflo01002
]
136469479
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136469479
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
136469479
Peptidases and inhibitors [BR:
mflo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
136469479
Ubiquitin system [BR:
mflo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
136469479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
136469479
NCBI-ProteinID:
XP_066323759
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All DBs
Position
8:81336561..81340563
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AA seq
590 aa
AA seq
DB search
MCEDCSREEGAGGRPKYRRILVCLECGRHSCGDSRSYLPCGHARDHARQEQHWVDALFDD
PQTAFCFKCECERPVYPEPDDELGTIIGKIQAGGGGHTFGFDMPRDLATRLLKLGDAWRV
AELGSGNTQGYAIRGMPNSGNTCYMNAMVQCLLALNKLWAWMLGPYPPPGHLGMALKELF
VEASAADSAGRLLNPDRLLRSVRLHAGKYEAYKMHDSYELLESLRNALQDEESGIENPYR
ERGAPTVIDSIFRGELLETRSCIYCQSASAFHGHFRELSLSLPSEEDLSKSIKSQPMKAA
TQLLSANISDAKVEQMVQMTTDSPYPEDMGQPPLVAPLKHDAWTTSCNYVDKNGKEIWDN
NCIPTIEDCLSLFFKEEVVERSCDCSKVPMEPSTNQSKKGKQMKVGTNDEVAVNGGHTEQ
SYRTTCPNKQPSELNSMLVECQSSYCRQQNGSDVESETIQMADTNTVGANSRMSCGQKET
EYHDGPKWFSTHCGSSLRINSKSVDKNNTIYRLAGVVEHRGGLFMNGGHYVAYVRARKIR
NQQQQSSCSSSWFCVDDSNIREATLEEVLKCKPYVLFYERMEDKMTSEIR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgaggactgctcgcgtgaggagggggccggcggccggcccaagtatcgccgtatc
ctggtgtgcctggaatgcggccggcattcttgcggggattcgaggagctacctcccgtgc
gggcacgctcgggatcacgccaggcaggagcagcactgggtcgacgcgctgttcgacgat
ccacagactgcattctgcttcaagtgcgagtgtgaacgaccagtatatccagagccagat
gacgagctggggacgatcatcggcaaaattcaggcgggcggcggcggccatacgtttgga
ttcgacatgccccgcgatcttgccacccggttgctcaagctcggagacgcatggcgtgtg
gctgagctcggatcggggaatacccaaggctatgctatcagagggatgccgaacagcggg
aacacatgctacatgaacgcgatggtgcagtgcctcctcgcgctcaacaagttgtgggca
tggatgttagggccgtatcctccgccgggtcaccttggcatggcactgaaggagcttttt
gtggaggcaagcgctgctgattctgcgggacgccttctgaacccagatagactattgaga
agtgtgcgcttacatgctggcaagtacgaagcctacaagatgcatgacagctacgaattg
cttgagtccttgcgcaatgctttgcaggatgaggaaagtggaattgagaacccttacagg
gaaagaggtgctccgacagttattgattcgattttcaggggtgagctgttagagacacgg
tcctgcatatattgtcagtctgcttcggctttccatggacatttccgggagctctcacta
tcgctgccatcagaggaggatctaagcaagagtatcaaatctcaacccatgaaggctgca
actcaattactttcagcaaacatctccgatgctaaagttgagcaaatggttcagatgaca
acagattccccctatccagaagatatgggtcaacctccacttgttgccccactaaaacat
gatgcatggacgacatcgtgcaactatgtagataaaaatggcaaggaaatatgggataac
aattgtataccaacaatcgaggattgtctatcactattttttaaagaggaggtggtagaa
aggagctgtgattgttccaaggtacctatggagccaagtactaatcaaagcaaaaagggt
aagcagatgaaggtaggtaccaatgatgaggtagcagttaatgggggccatactgaacag
tcatacaggacaacatgcccaaataagcaacccagtgaattgaatagtatgttagtagaa
tgccaatcttcttattgtagacaacaaaatggttctgatgtagagagtgaaactatacag
atggcagatacaaatactgttggagcaaattcaaggatgagttgtggtcaaaaggaaact
gaatatcatgacggaccaaaatggttttcaactcattgtggttcaagtttgagaataaat
tcaaagtctgtggacaaaaataacaccatctatcgtctagctggtgtcgtagagcaccgt
ggtggactcttcatgaatgggggacactatgttgcttatgtcagagcaaggaagattaga
aatcagcaacaacagagcagttgctcttcctcatggttttgtgtggacgatagtaacatc
agggaagccactctagaagaagttctaaagtgcaagccttatgttcttttctatgagagg
atggaagacaagatgactagtgagattagatag
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