Miscanthus floridulus: 136469981
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Entry
136469981 CDS
T10264
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
mflo Miscanthus floridulus
Pathway
mflo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136469981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136469981
03036 Chromosome and associated proteins [BR:
mflo03036
]
136469981
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136469981
Coactivators
SAGA/TFTC/STAGA complex
136469981
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
136469981
STAGA complex
136469981
TFTC complex
136469981
SAGA complex
136469981
SLIK complex
136469981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
DUF4184
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
136469981
NCBI-ProteinID:
XP_066324086
LinkDB
All DBs
Position
1:28288505..28293642
Genome browser
AA seq
544 aa
AA seq
DB search
MSIVPKETIEVIAQSVGIPSLGADVAVALAPDVEYRLREIMQESIKCMRHAKRTVLTADD
VDSALGLRNVEPVYGFVSGDPLRFKRAVGHKDLFYLDDREVDFKEIIEAPLPKAPLDTSV
VAHWLAIEGVQPAIPENPAIDAIVPPTENKRSEHGKDDGLPVDVKLPVKHVLSRELQMYF
DKIAELTMSRSDTSLFKEALVSLAKDSGLHPLVPYFSYFIVDEVTRSLGDLPVLFALMRV
VQSLLRNPHIHIEPYLHQLMPSMITCIVAKRLGHRLSDNHWELRDFSANLVASVCRRFGH
VYHNLQNRLTKTLIHAFLDPAKSLTQHYGAVQGISALGPSAIRLLLLPNLVTYMQLLEPE
LQLEKQKNEMKRKEAWRVYGALLCAAGKCLYDRLKLFPGLLSLSKRPLLRSNKRVLTNPN
KRKSSADLSSTQPPLKKMATDATANSMASASMGGNMQGAMDGFSNQLANPGMMQASSSGQ
MVESIPSAAIRRDQGSDLAQRVSAVLRQAWKEDQDTGHLLGSLYEVFGEAIFSFVQPPEI
SLFV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgtgcccaaggagacgatcgaagtcatcgctcagagcgtcggcatccccagc
ctcggcgccgatgtcgccgtcgcgctggcccccgacgtggaataccgcctccgcgagatc
atgcaggaatccattaaatgtatgcggcatgcaaagcggactgttctgacggcggatgat
gttgacagtgccctgggcctaaggaatgttgagcccgtgtatggatttgtttctggtgat
ccattgcgttttaagagagctgttgggcataaggatctcttctatcttgatgatcgggag
gtagacttcaaagagattattgaagctcctctgcctaaagccccactggacacatcagtt
gtagcccattggctagcgatcgagggggtgcaacctgcaataccggagaatcctgctatt
gacgcaattgtaccaccaactgaaaataaaaggtctgagcatgggaaggatgatggactt
ccagttgatgtcaagcttcctgttaagcatgtattatctagagaactacagatgtacttt
gataaaatagctgagcttactatgagtagatctgatacgtccctttttaaagaagcctta
gtgagcttggcaaaagattctggtcttcatcctttggttccttacttttcctacttcatt
gtagacgaggttacccggagtttgggtgatcttcctgttttatttgctctaatgagagta
gtccaaagtcttctccgtaatccacatattcatattgaaccttatttgcaccagctaatg
ccatcaatgatcacttgcattgttgcaaaaaggctagggcataggctctcagataaccac
tgggaacttagagacttctctgccaatttggttgcctcggtatgtcggaggtttggtcat
gtctatcacaaccttcaaaatcggctaactaaaacattgatccatgcatttcttgatcct
gccaaatcactgacacaacattacggtgctgttcaagggatatctgcattggggcccagc
gcgattagacttcttcttttgcccaaccttgtgacatatatgcaacttctggagccggaa
ctgcagcttgagaagcagaaaaacgagatgaaaaggaaggaagcttggcgtgtttatggt
gccttgctgtgtgctgcaggcaaatgcttgtatgatcggttgaaattatttcctggtttg
ctttctctatcgaagcgacctcttttacggagcaacaaaagggtcttaaccaacccaaat
aagcgaaaatctagtgcagatctctcttcaactcagccacctctgaagaagatggcaaca
gacgcaacagccaactccatggcctcagcttccatgggaggaaacatgcaaggtgccatg
gatggcttttccaaccagttagccaaccctggcatgatgcaggcctcgtcctccgggcag
atggtggagagcattccatcagctgccatccggagagatcagggcagtgatctcgctcag
agagtttctgcagttcttaggcaagcttggaaggaggatcaggacactggtcatctcttg
gggtctctgtatgaggtcttcggtgaagccatcttctcctttgtccaaccaccagagatt
tccttgtttgtgtag
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