Miscanthus floridulus: 136471012
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Entry
136471012 CDS
T10264
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136471012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136471012
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136471012
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136471012
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
136471012
NCBI-ProteinID:
XP_066324840
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All DBs
Position
8:complement(6745990..6749477)
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AA seq
311 aa
AA seq
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MAPGSSIVTVVPESDCGDDDGLSEAFGGIRLDVDSASKPWSTSLANVALSSLSGLNDLLE
CPVCTNSMRPPILQCPNGHTICSSCKHRVENHCPTCCQELGNIRCLALEKVAEQLQLPCK
YQSMGCTEIHPYKNKLKHEQFCRFRPYNCPYAGSECLITGDVPFLVSHLINDHKVDLHEG
CTFNHRYVKPNPYEVENATWMLTVFKCFGQHFCLHFEAFLLGMAPVYMAFLRFMGEESEA
QGFGYSLEVGGGGRKLTWQGTPWSIRDSHRKVRDSFDGLIIHRNMALFFSGGGRQELKLR
VTGRIWREQGQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaggaagcagcattgtgactgtagtccctgagtcggactgtggagatgacgat
gggctttctgaggcatttgggggtatcaggcttgacgtagactctgcaagtaaaccgtgg
tctacatcgctagccaatgttgcattatcatcactgtctggcttgaatgatttgctcgaa
tgtccagtgtgtaccaactcaatgcgcccacctatactccagtgcccaaatggccacaca
atctgctctagttgcaagcacagggtagagaaccattgcccaacgtgttgccaggaactg
ggaaacatcaggtgcttagcgcttgagaaggtggcagaacaacttcagcttccatgcaaa
taccagagtatgggatgcactgagattcacccatacaagaacaaactcaagcacgagcag
ttctgcaggttcaggccatacaactgcccgtacgcaggttcagagtgtctgatcacaggt
gatgttccatttctggtgtctcatctcatcaatgaccataaggtggacttgcatgagggc
tgcacatttaaccaccgatatgtgaagcccaacccttacgaagtggaaaatgctacatgg
atgctcactgttttcaagtgttttgggcagcacttctgcctgcacttcgaggcgttcctg
ctggggatggcgccggtgtacatggcgttcctgcggttcatgggcgaggagagcgaggca
caggggttcgggtacagcctggaggtgggcgggggtgggcggaagctgacgtggcagggc
acgccgtggagcatcagggacagccaccggaaggtgcgggacagcttcgacgggctcatc
atccacaggaacatggcgctcttcttctcgggcggcggcaggcaagagctcaagctgcgg
gtcacaggccgcatctggagggagcaagggcaatga
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