Miscanthus floridulus: 136471041
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Entry
136471041 CDS
T10264
Name
(RefSeq) U3 snoRNP-associated protein-like YAOH
KO
K14793
ribosomal RNA-processing protein 9
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mflo03009
]
136471041
Ribosome biogenesis [BR:
mflo03009
]
Eukaryotic type
90S particles
Other 90S particles
136471041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_SPT8
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF12
VPS8_N
Beta-prop_DCAF4
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
136471041
NCBI-ProteinID:
XP_066324873
LinkDB
All DBs
Position
1:2435466..2444429
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AA seq
511 aa
AA seq
DB search
MAPRPRKRASRPKPRPGSRRGGGGGDDDPFFESEPKRRRGGRDEDIESEDSDDDGVAPLG
GGFDEDGDEGGKEEDEETVGEKKMRMAKEWLQKVTEVAKRGQEDEDEDEDESGGRRVAEL
LQRKQLEESGRKRREIAARVLPPGPQDGFKVLVKHRQPVTAVALSKDSDKGFSASKDGII
MHWDVETGKCEKYIWPSENVLVSHHAKPPVSAKRSKQVLALAASSDGRYLASGGLDRHIH
LWDVRSREHIQAFSGHRGPISCLSFAPDSSELFSGSFDRSIMQWNAEDRTYMNCLYGHQN
EILIMDALSKDRILTVARDRTMHLWKIPEESQLVFRAPAAASLECCCFIDDKEFLSGSDD
GSIELWSIMRKKPILIIKNAHPVSYTNLNSVDNDDESPKENGIHKPENVPSAAQSWVGTV
AARRGSDLAASGAGNGLVRLWAIKPDSKGVEPLFDLKLDGFVNSLAIAKSGRFIVAGVGQ
EPRLGRWGQVRSAQNGVAIHPIRLKDEKEDL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcgcccccgcaagcgggcctcgcgccccaagccccgcccgggctcccgacgt
ggcggcggcggaggggacgacgaccccttcttcgagtccgagcccaagcgccgccgcggg
ggccgtgacgaggacatcgagagcgaggacagcgacgatgacggcgtggctccgcttggc
ggcgggtttgatgaggatggggacgagggcggtaaggaggaggacgaggagacggtgggg
gagaagaagatgcgtatggcgaaggagtggctgcagaaggtcactgaggtcgctaagagg
gggcaggaggacgaggacgaggacgaggacgagtcgggagggagacgggtggcggagctc
ctgcagaggaagcagctcgaagagagcggcaggaagcggagggagattgctgcgagggta
ttaccaccgggccctcaggatggctttaaggttcttgtgaagcaccggcaacctgttact
gctgttgctttatccaaggatagtgataagggattttcagcatcaaaagatggaatcatt
atgcattgggatgttgaaactgggaaatgtgagaagtatatatggccaagtgaaaatgtg
ttggtttcacatcatgctaaaccaccagtatcagctaaaagaagcaagcaagtgctggct
ttagctgccagttctgatggtcgttacttggcgagcggtggcttggaccgtcatatccat
ttatgggatgttaggtcacgggaacacatacaggcatttagcggccatcggggaccaata
tcatgtctttcttttgcgccagactcttcagagctattctctggttcttttgaccgttca
ataatgcagtggaatgcagaggatagaacatacatgaactgtttatatgggcatcagaat
gaaatcctgataatggatgcacttagtaaagacaggattctaactgtagcacgggaccgt
acgatgcacctttggaagattccagaagagtcgcagttagtgttccgtgctcctgctgcc
gcatctttagagtgctgctgctttattgatgacaaggaatttttgtctggatctgatgat
ggaagcattgagctttggagcataatgaggaaaaagcctattctcataataaaaaatgct
catccagtatcatatactaaccttaattcagttgacaatgatgatgagtcacctaaagaa
aatggaatacataaacctgaaaatgtgccatccgcagcccagtcatgggttggtactgtt
gctgcaagaagaggttctgaccttgctgcatcaggagcaggaaatggtttagttcgtctc
tgggctatcaaacctgattccaagggagtcgagccattattcgatttgaaactggatgga
tttgttaattctcttgccatagcaaaatctggacgttttattgttgctggtgttggccag
gagcctcgccttggaagatggggacaagttcgatcggcccaaaatggagttgcaattcac
ccaatccgactaaaagatgagaaagaggatttgtag
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