Miscanthus floridulus: 136471619
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Entry
136471619 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: protein RDM16-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136471619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136471619
Spliceosome [BR:
mflo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
136471619
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
136471619
NCBI-ProteinID:
XP_066325464
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Position
8:36326719..36334374
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AA seq
545 aa
AA seq
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MLNNKPGTAFAATQVSKEEAKTSVSAVDAQLFSKGEAKPTDVSGTLAIGGAIGIPGLTNI
PNLDSVKRAQELAAKMGFRQDPQFGPLINLFPGTSTEVTVPQRPAKAPVLRLDAQGREID
EQGNVISMTKPTNLSTLKVNINKQKKEAFQIIKPDLDSLAKSSVHFDERMGINQKKLLRP
KRPGFQFVEEGKLTRQAELQKIKSQFGEAQAKEFKVKQAQLAKAKAEVDINPNLIEVAVG
VRAPKQKQKEEIPEIEPWDAKILLSATYEDISVEKLNMDKITMYVEHPEPYDPPAEPAPL
PPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLLEPPKPKVKMSNLMKVLGSEAVQDP
TRLEMEIRTAAAEREQAHVDRNISRKLTPSERREKKERKLFDDPTNTVETIICVYKIRDL
SHPQTRFKVDVNAQENRLTGAAVITDSISVVVVEGGKKSIKRYNKLMLNRIDWATAVGGD
EDAEVEADKPVNSCVLVWQGSVAKPTFHRFTVHNCRSEAAAKKVFIDAKVPHYWDLAVNF
SEDSS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgcttaataataagcctggtacagcttttgctgctacacaagtttctaaagaagaagca
aaaacttctgtatcagctgtagatgcacaactcttttctaaaggagaagcaaaacctact
gatgtctctggaacgttggccataggtggtgcaattggtattccaggtcttacaaacatt
cccaatctcgattctgtgaagcgagcccaagaacttgctgctaagatggggttccgccaa
gatccacaatttggtcctctcataaacttattccctggtacatccactgaggttactgta
ccacaaagacctgcaaaggctcctgttcttcgccttgatgctcaaggtagggaaattgat
gagcagggaaatgttatcagcatgacaaagccaacaaatctgagtactctgaaggtcaat
ataaacaagcagaagaaagaggcttttcaaataatcaagccggacttggactctcttgca
aaatcaagtgttcattttgatgaaaggatgggcataaaccaaaagaagctcctccgtcct
aaaaggccaggatttcagttcgttgaagagggtaaactcactaggcaggcagaattgcag
aaaattaagagtcaatttggtgaagcacaagctaaagagttcaaagtaaagcaagcccag
cttgctaaggcaaaggcagaagtagacataaatccaaatcttattgaggttgctgttggt
gtgagagctccaaaacaaaagcagaaggaagagatccctgaaattgagccatgggatgca
aaaattttactttctgccacatatgaggatatctctgtggagaagcttaatatggacaag
atcaccatgtatgttgaacatccagaaccatatgatccacctgctgaacctgcaccactg
ccgccccagccactgaagttgactaagaaggagcagaagaagttgagaacacaaaggcgt
cttgctaaggaaaaagataggcaagaaatgattagacaaggccttttggagccacccaag
cccaaggtcaaaatgagcaatcttatgaaagtactaggctctgaagctgtgcaagatccc
acacggttggagatggaaataagaacagctgctgcagagcgtgagcaggctcacgttgac
cgtaacatttcccgcaagctcacaccatctgagcgccgtgagaagaaagaacggaagctt
tttgatgatcctactaacacagtggagactataatttgtgtttacaagataagagacctg
tcccatccacagacacgcttcaaagtcgatgtgaatgcacaagagaatagactaacaggt
gctgcggtcatcactgatagtatcagtgttgtggttgttgaaggggggaagaagtcaatc
aaaaggtataataagctcatgcttaaccgtatagactgggctactgctgttggtggtgat
gaagatgcagaagtggaagctgacaagccagtgaatagctgtgtattggtctggcagggt
agtgtggccaagcccaccttccacaggttcacggtacacaactgccggagtgaggctgca
gctaagaaggttttcattgacgctaaagttcctcactactgggaccttgctgtcaatttc
tcagaagattcttcctga
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