Miscanthus floridulus: 136472159
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Entry
136472159 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 1 beta-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflo03032
]
136472159
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
136472159
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Topoisomerases
136472159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
RodZ_C
TolA_bind_tri
DUF641
LPP
DivIC
CagE_TrbE_VirB
Motif
Other DBs
NCBI-GeneID:
136472159
NCBI-ProteinID:
XP_066325981
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Position
8:complement(57032722..57036981)
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AA seq
564 aa
AA seq
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RSLLFSIITMKVPPGSGGGKKWTMLEHNGVIFPPTYKPHGVKMLYNGQPVDLTPEQEEVA
TMFAVMKSTEYASKRTFVDNFFTDWRKIIGKDHIIKKFKLCDFTPIYEWHFREKEKKQMT
AEEKKALQEEKLKQEEKYMWAAVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRSQPS
DITINIGEGAPVPECPISGESWKKVKHDNTATWLAFWNDPISQKDFKYVFLAESSSLRGQ
SDKEKYEKSRKLKGHIQRIRENYTEDFKNKDVTRMQIAVATYLIDKVALRAGNEKDNDEA
DTVGCCMLKVDNITCIPPNKIQFDFXGKDSIRYFYTAEVEELVYKAIEGFLTGKKTGEDL
FDKLDTTRLNAHLKDLMPGLTAEVFRTYNASITLDRILHEEIEDGTLVERIAFYQRANKE
VAIICNHQRSVSKSHESQMTRLNEKIDELKSQMEELKADLSKAKKGKPLGYDKEGKQKRD
LAPEAFEKKIAMLEGKIEKMEMDKNIKDDLKTVALGTSKIKYLDPRITIAWCKRHEVPFE
KVYFNKSLIAKFKWATDVDPEFRF
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
aggtccctcctgttctcaataataacaatgaaggtacctcctggatctggtggaggaaag
aaatggactatgttggagcacaatggtgttattttccctcctacttacaagcctcatggt
gtcaaaatgctttacaacgggcaacctgttgatctgacaccagaacaagaggaggttgca
acaatgtttgctgtgatgaaaagcacagaatatgcgagcaaaagaacatttgttgataac
tttttcacagactggagaaaaattattggaaaagatcatattattaagaaattcaagctt
tgtgatttcacaccaatatatgaatggcacttcagagagaaggagaagaagcagatgaca
gcagaggagaaaaaagcattgcaggaggagaaattgaaacaagaggagaaatacatgtgg
gctgctgtagatggtgttaaagagaaggtcggaaatttcagagtagaaccacctggtttg
ttcaggggacgtggagaacatccaaagatgggaaaactgaagcgccgcagtcaaccaagc
gatatcacaataaatatcggagaaggagctccagtccctgagtgcccgatatctggagaa
agttggaagaaagtgaaacatgacaatacggctacgtggttggccttttggaatgatccc
attagccaaaaggatttcaagtatgttttcctggcagaaagcagctcactgagggggcaa
agtgacaaagagaagtatgagaagtccagaaaattgaagggtcacatacaaagaattcgt
gagaattatacagaagatttcaaaaacaaagatgtgaccaggatgcaaattgctgtggca
acatatcttatagataaagtagcccttagggcaggcaatgaaaaggacaatgatgaagct
gacactgttggttgctgtatgttgaaggttgataatattacttgtattccgccaaataag
attcagtttgactttnngggtaaagattctataagatacttttacactgctgaggttgaa
gagcttgtgtataaggcaattgagggtttccttactggaaagaagacgggagaagatctc
tttgacaagctagatacaactaggctaaatgctcacttaaaggatctaatgcctgggctt
actgcagaagtgttccgtacatacaatgcttccatcacattggacagaattttgcatgaa
gaaatagaagatggaactcttgtagaaagaatcgctttctatcaacgagcaaacaaagag
gttgccataatctgtaaccatcagcgtagtgtctcaaaatcacatgaatcccagatgact
agactgaacgaaaagattgatgaattgaagtcccaaatggaggagctgaaggcagacttg
agcaaagcgaagaaagggaagcctctaggatatgataaagaggggaagcaaaagagggac
ttggctcctgaagcgttcgaaaagaagatcgcaatgcttgaaggaaagatagagaagatg
gagatggataagaatataaaagatgatctgaagacggttgcacttggaacatcaaagatc
aagtaccttgatcctaggattaccatcgcatggtgcaagcgccatgaggtcccttttgag
aaggtatatttcaacaaatctcttatcgcgaaatttaaatgggcaacggacgttgaccca
gaattcagattctag
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